Structures with Exotic Sources: Difference between revisions
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This page lists 1, | This page lists 1,558 sources that occur in only one PDB structure. The most common sources and other PDB statistics are available at [[Believe It or Not]]. | ||
==Archaea== | ==Archaea== | ||
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* Ferroplasma acidiphilum [[3wj2]] | * Ferroplasma acidiphilum [[3wj2]] | ||
* Haloarcula quadrata [[2zua]] | * Haloarcula quadrata [[2zua]] | ||
* Halobacterium [[3wqj]] | |||
* Haloquadratum walsbyi C23 [[4wav]] | * Haloquadratum walsbyi C23 [[4wav]] | ||
* Halorubrum chaoviator [[1uaz]] | * Halorubrum chaoviator [[1uaz]] | ||
* Haloterrigena thermotolerans [[4fbz]] | * Haloterrigena thermotolerans [[4fbz]] | ||
* Hyperthermus butylicus DSM 5456 [[2lvs]] | * Hyperthermus butylicus DSM 5456 [[2lvs]] | ||
* Ignicoccus hospitalis KIN4/I [[4qo5]] | |||
* Metallosphaera yellowstonensis MK1 [[5kwd]] | * Metallosphaera yellowstonensis MK1 [[5kwd]] | ||
* Methanobrevibacter ruminantium M1 [[4fio]] | * Methanobrevibacter ruminantium M1 [[4fio]] | ||
| Line 30: | Line 32: | ||
* Methanosarcina mazei S-6 [[1l0q]] | * Methanosarcina mazei S-6 [[1l0q]] | ||
* Methanosarcina thermophila CHTI-55 [[2nbj]] | * Methanosarcina thermophila CHTI-55 [[2nbj]] | ||
* Methanothermobacter sp. CaT2 [[5t61]] | |||
* Methanothrix thermoacetophila [[3zid]] | * Methanothrix thermoacetophila [[3zid]] | ||
* Methanothrix thermoacetophila PT [[5ht7]] | * Methanothrix thermoacetophila PT [[5ht7]] | ||
| Line 70: | Line 73: | ||
* Acinetobacter sp. NBRC 100985 [[4xuk]] | * Acinetobacter sp. NBRC 100985 [[4xuk]] | ||
* Actinobacillus [[1kp0]] | * Actinobacillus [[1kp0]] | ||
* Actinomadura [[2xdm]] | |||
* Actinomadura verrucosospora [[5du2]] | * Actinomadura verrucosospora [[5du2]] | ||
* Actinomyces [[4auc]] | * Actinomyces [[4auc]] | ||
| Line 215: | Line 219: | ||
* Curtobacterium pusillum [[5k3w]] | * Curtobacterium pusillum [[5k3w]] | ||
* Cyanobacteria [[1tps]] | * Cyanobacteria [[1tps]] | ||
* Cyanothece sp. PCC 7424 [[5k79]] | * Cyanothece sp. PCC 7424 [[5k79]] | ||
* Cyanothece sp. PCC 8801 [[5ek8]] | * Cyanothece sp. PCC 8801 [[5ek8]] | ||
| Line 360: | Line 363: | ||
* Listeria grayi DSM 20601 [[4gm6]] | * Listeria grayi DSM 20601 [[4gm6]] | ||
* Listeria ivanovii [[1zwx]] | * Listeria ivanovii [[1zwx]] | ||
* Listeria monocytogenes EGD [[2y5p]] | |||
* Listeria monocytogenes F6900 [[3tng]] | * Listeria monocytogenes F6900 [[3tng]] | ||
* Lyngbya [[4gvu]] | * Lyngbya [[4gvu]] | ||
| Line 372: | Line 376: | ||
* Methylobacterium radiotolerans JCM 2831 [[4jed]] | * Methylobacterium radiotolerans JCM 2831 [[4jed]] | ||
* Methylocaldum szegediense [[4rg8]] | * Methylocaldum szegediense [[4rg8]] | ||
* Methylocystis hirsuta [[2ygi]] | |||
* Methylocystis parvus OBBP [[5icq]] | * Methylocystis parvus OBBP [[5icq]] | ||
* Methylocystis sp. [[2ygj]] | |||
* Methylomicrobium album BG8 [[4bz4]] | * Methylomicrobium album BG8 [[4bz4]] | ||
* Methylomicrobium alcaliphilum 20Z [[4quv]] | * Methylomicrobium alcaliphilum 20Z [[4quv]] | ||
| Line 379: | Line 385: | ||
* Microbacterium [[1hkh]] | * Microbacterium [[1hkh]] | ||
* Microbacterium sp. Gsoil167 [[4r27]] | * Microbacterium sp. Gsoil167 [[4r27]] | ||
* Microbispora [[2mh5]] | |||
* Microbispora corallina [[5ehk]] | * Microbispora corallina [[5ehk]] | ||
* Microbulbifer thermotolerans [[3wz1]] | * Microbulbifer thermotolerans [[3wz1]] | ||
* Micrococcus antarcticus [[3w53]] | * Micrococcus antarcticus [[3w53]] | ||
| Line 397: | Line 403: | ||
* Mycobacterium goodii [[3pft]] | * Mycobacterium goodii [[3pft]] | ||
* Mycobacterium rhodesiae JS60 [[4mj3]] | * Mycobacterium rhodesiae JS60 [[4mj3]] | ||
* Mycobacterium sp. DSM 3803 [[2waw]] | |||
* Mycobacterium tuberculosis 7199-99 [[4qvb]] | * Mycobacterium tuberculosis 7199-99 [[4qvb]] | ||
* Mycobacterium tuberculosis BT1 [[4r0n]] | * Mycobacterium tuberculosis BT1 [[4r0n]] | ||
| Line 406: | Line 413: | ||
* Mycobacterium tuberculosis KZN 4207 [[4wnb]] | * Mycobacterium tuberculosis KZN 4207 [[4wnb]] | ||
* Mycobacterium tuberculosis SUMu008 [[4w78]] | * Mycobacterium tuberculosis SUMu008 [[4w78]] | ||
* Mycolicibacterium fortuitum [[2cc1]] | |||
* Mycoplasma [[1d02]] | * Mycoplasma [[1d02]] | ||
* Mycoplasma gallisepticum S6 [[2ndp]] | * Mycoplasma gallisepticum S6 [[2ndp]] | ||
| Line 432: | Line 440: | ||
* Nocardiopsis halophila [[4d3s]] | * Nocardiopsis halophila [[4d3s]] | ||
* Nocardiopsis sp. F96 [[2hyk]] | * Nocardiopsis sp. F96 [[2hyk]] | ||
* Nodularia spumigena [[1ay3]] | |||
* Nonlabens dokdonensis DSW-6 [[4rep]] | * Nonlabens dokdonensis DSW-6 [[4rep]] | ||
* Nonlabens ulvanivorans [[4ce7]] | * Nonlabens ulvanivorans [[4ce7]] | ||
| Line 495: | Line 504: | ||
* Pseudomonas dacunhae ATCC 21192 [[3fdd]] | * Pseudomonas dacunhae ATCC 21192 [[3fdd]] | ||
* Pseudomonas fluorescens bv. A [[1joi]] | * Pseudomonas fluorescens bv. A [[1joi]] | ||
* Pseudomonas protegens [[5ahk]] | * Pseudomonas protegens [[5ahk]] | ||
* Pseudomonas pseudoalcaligenes [[4le6]] | * Pseudomonas pseudoalcaligenes [[4le6]] | ||
| Line 551: | Line 559: | ||
* Ruminococcus albus [[3vw5]] | * Ruminococcus albus [[3vw5]] | ||
* Saccharophagus degradans [[2cdo]] | * Saccharophagus degradans [[2cdo]] | ||
* Salinispora arenicola CNS-205 [[4rd7]] | * Salinispora arenicola CNS-205 [[4rd7]] | ||
* Salmonella enterica subsp. enterica serovar Choleraesuis [[2k4w]] | * Salmonella enterica subsp. enterica serovar Choleraesuis [[2k4w]] | ||
| Line 658: | Line 665: | ||
* Streptomyces hygroscopicus subsp. jinggangensis 5008 [[4p53]] | * Streptomyces hygroscopicus subsp. jinggangensis 5008 [[4p53]] | ||
* Streptomyces koganeiensis [[4ufq]] | * Streptomyces koganeiensis [[4ufq]] | ||
* Streptomyces leeuwenhoekii [[2n5c]] | |||
* Streptomyces macromomyceticus [[2mcm]] | * Streptomyces macromomyceticus [[2mcm]] | ||
* Streptomyces malayensis [[4jw3]] | * Streptomyces malayensis [[4jw3]] | ||
| Line 794: | Line 802: | ||
* Anguilla anguilla [[1k12]] | * Anguilla anguilla [[1k12]] | ||
* Anisakis simplex [[2mar]] | * Anisakis simplex [[2mar]] | ||
* Anochetus emarginatus [[2nbc]] | |||
* Antheraea pernyi [[3gwj]] | * Antheraea pernyi [[3gwj]] | ||
* Anticarsia gemmatalis [[5dbq]] | * Anticarsia gemmatalis [[5dbq]] | ||
| Line 817: | Line 826: | ||
* Atropoides nummifer [[2aoz]] | * Atropoides nummifer [[2aoz]] | ||
* Aurelia aurita [[2lg4]] | * Aurelia aurita [[2lg4]] | ||
* Avicularia avicularia [[3dtp]] | |||
* Babesia canis [[2lcu]] | * Babesia canis [[2lcu]] | ||
* Bemisia argentifolii [[1e3j]] | * Bemisia argentifolii [[1e3j]] | ||
* Bertholletia excelsa [[2lvf]] | * Bertholletia excelsa [[2lvf]] | ||
* Bionia pedicellata [[3u4x]] | * Bionia pedicellata [[3u4x]] | ||
* Blastomyces dermatitidis ER-3 [[2lwb]] | * Blastomyces dermatitidis ER-3 [[2lwb]] | ||
* Boiga dendrophila [[2h5f]] | * Boiga dendrophila [[2h5f]] | ||
* Bombina variegata [[2kra]] | * Bombina variegata [[2kra]] | ||
* Bothrops atrox [[5ts5]] | |||
* Bougainvillea spectabilis [[3ctk]] | * Bougainvillea spectabilis [[3ctk]] | ||
* Brachyopsis rostratus [[2zib]] | * Brachyopsis rostratus [[2zib]] | ||
| Line 979: | Line 989: | ||
* Hordeum sp. [[2sni]] | * Hordeum sp. [[2sni]] | ||
* Humulus lupulus [[3a8t]] | * Humulus lupulus [[3a8t]] | ||
* | * Hydra [[2k35]] | ||
* Hyla annectans [[2kcr]] | * Hyla annectans [[2kcr]] | ||
* Hyoscyamus muticus [[5jo7]] | * Hyoscyamus muticus [[5jo7]] | ||
| Line 989: | Line 999: | ||
* Jacaratia mexicana [[2bdz]] | * Jacaratia mexicana [[2bdz]] | ||
* Jasminum sambac [[2n5q]] | * Jasminum sambac [[2n5q]] | ||
* Juglans regia [[5ce9]] | |||
* Juniperus ashei [[1pxz]] | * Juniperus ashei [[1pxz]] | ||
* Katsuwonus pelamis [[1cyc]] | * Katsuwonus pelamis [[1cyc]] | ||
| Line 1,003: | Line 1,014: | ||
* Leiurus quinquestriatus quinquestriatus [[1lqq]] | * Leiurus quinquestriatus quinquestriatus [[1lqq]] | ||
* Lens culinaris subsp. culinaris [[2lj7]] | * Lens culinaris subsp. culinaris [[2lj7]] | ||
* Lentinus [[3x1b]] | |||
* Lentinus tigrinus [[2qt6]] | * Lentinus tigrinus [[2qt6]] | ||
* Lepidium virginicum [[2dre]] | * Lepidium virginicum [[2dre]] | ||
| Line 1,015: | Line 1,027: | ||
* Loa loa [[5hgq]] | * Loa loa [[5hgq]] | ||
* Lobophora variegata [[3m6g]] | * Lobophora variegata [[3m6g]] | ||
* Lonomia obliqua [[1kt2]] | |||
* Lotus tetragonolobus [[2eig]] | * Lotus tetragonolobus [[2eig]] | ||
* Lucilia sericata [[2lld]] | * Lucilia sericata [[2lld]] | ||
| Line 1,048: | Line 1,061: | ||
* Neurospora sitophila [[4awe]] | * Neurospora sitophila [[4awe]] | ||
* Nicotiana suaveolens x Nicotiana tabacum [[5kk4]] | * Nicotiana suaveolens x Nicotiana tabacum [[5kk4]] | ||
* Nigella sativa [[2nb2]] | |||
* Nilaparvata lugens [[3wyw]] | * Nilaparvata lugens [[3wyw]] | ||
* Notamacropus eugenii [[2kfl]] | * Notamacropus eugenii [[2kfl]] | ||
| Line 1,126: | Line 1,140: | ||
* Sabellastarte magnifica [[4bd9]] | * Sabellastarte magnifica [[4bd9]] | ||
* Saccharomyces bayanus [[5i9e]] | * Saccharomyces bayanus [[5i9e]] | ||
* Saccharomyces cerevisiae EC1118 [[3qle]] | * Saccharomyces cerevisiae EC1118 [[3qle]] | ||
* Saccharomyces cerevisiae JAY291 [[4tw5]] | * Saccharomyces cerevisiae JAY291 [[4tw5]] | ||
| Line 1,169: | Line 1,182: | ||
* Talaromyces trachyspermus [[3wfl]] | * Talaromyces trachyspermus [[3wfl]] | ||
* Taxus canadensis [[3nz4]] | * Taxus canadensis [[3nz4]] | ||
* Terebridae [[2mix]] | |||
* Theileria parva [[2xfx]] | * Theileria parva [[2xfx]] | ||
* Theonella sp. [[1tmb]] | * Theonella sp. [[1tmb]] | ||
| Line 1,185: | Line 1,199: | ||
* Trachemys scripta [[1u5l]] | * Trachemys scripta [[1u5l]] | ||
* Trachycarpus fortunei [[4usc]] | * Trachycarpus fortunei [[4usc]] | ||
* Trametes [[3kw7]] | |||
* Trametes cinnabarina [[2xyb]] | * Trametes cinnabarina [[2xyb]] | ||
* Trametes maxima [[2h5u]] | * Trametes maxima [[2h5u]] | ||
* Trametes versicolor [[1kya]] | * Trametes versicolor [[1kya]] | ||
* Trema tomentosa [[3qqq]] | * Trema tomentosa [[3qqq]] | ||
| Line 1,213: | Line 1,227: | ||
* Vipera ammodytes [[1vpi]] | * Vipera ammodytes [[1vpi]] | ||
* Vipera aspis aspis [[1wq8]] | * Vipera aspis aspis [[1wq8]] | ||
* Vipera nikolskii [[2i0u]] | * Vipera berus nikolskii [[2i0u]] | ||
* Vitis rotundifolia [[5ku7]] | * Vitis rotundifolia [[5ku7]] | ||
* Volvox carteri f. nagariensis [[5k2l]] | * Volvox carteri f. nagariensis [[5k2l]] | ||
* Xenopsylla cheopis [[5k6d]] | * Xenopsylla cheopis [[5k6d]] | ||
* Xenopus [[4bpl]] | * Xenopus [[4bpl]] | ||
| Line 1,237: | Line 1,250: | ||
* Aichivirus B [[5lz6]] | * Aichivirus B [[5lz6]] | ||
* Anomala cuprea entomopoxvirus [[4yn1]] | * Anomala cuprea entomopoxvirus [[4yn1]] | ||
* Aves polyomavirus 1 [[3iys]] | |||
* Avian myeloblastosis virus [[1h8a]] | * Avian myeloblastosis virus [[1h8a]] | ||
* Avian myeloblastosis-associated virus [[1mvp]] | * Avian myeloblastosis-associated virus [[1mvp]] | ||
| Line 1,249: | Line 1,263: | ||
* Beet yellows virus [[2cwo]] | * Beet yellows virus [[2cwo]] | ||
* Blotched snakehead virus [[2gef]] | * Blotched snakehead virus [[2gef]] | ||
* Bluetongue virus 10 [[2jh8]] | |||
* Bluetongue virus 8 [[1uty]] | * Bluetongue virus 8 [[1uty]] | ||
* Bombyx mori densovirus 1 [[3p0s]] | * Bombyx mori densovirus 1 [[3p0s]] | ||
| Line 1,276: | Line 1,291: | ||
* Cucumber mosaic virus (strain FNY) [[1f15]] | * Cucumber mosaic virus (strain FNY) [[1f15]] | ||
* Cucumber necrosis virus [[4llf]] | * Cucumber necrosis virus [[4llf]] | ||
* Deltapapillomavirus 4 [[3iyj]] | |||
* Dendrolimus punctatus cypovirus 1 [[5h0r]] | * Dendrolimus punctatus cypovirus 1 [[5h0r]] | ||
* Dengue virus 2 16681-PDK53 [[3evg]] | * Dengue virus 2 16681-PDK53 [[3evg]] | ||
| Line 1,305: | Line 1,321: | ||
* Fuselloviridae [[2mlg]] | * Fuselloviridae [[2mlg]] | ||
* Galleria mellonella densovirus [[1dnv]] | * Galleria mellonella densovirus [[1dnv]] | ||
* Grouper iridovirus [[3khs]] | * Grouper iridovirus [[3khs]] | ||
* Guanarito mammarenavirus [[4c53]] | * Guanarito mammarenavirus [[4c53]] | ||
| Line 1,325: | Line 1,340: | ||
* Human adenovirus 14 [[3f0y]] | * Human adenovirus 14 [[3f0y]] | ||
* Human adenovirus 14p1 [[4zdg]] | * Human adenovirus 14p1 [[4zdg]] | ||
* Human adenovirus 16 [[3cnc]] | |||
* Human adenovirus 19 [[1uxb]] | * Human adenovirus 19 [[1uxb]] | ||
* Human adenovirus 52 [[4xl8]] | * Human adenovirus 52 [[4xl8]] | ||
| Line 1,337: | Line 1,353: | ||
* Human bocavirus 4 [[5us9]] | * Human bocavirus 4 [[5us9]] | ||
* Human coronavirus HKU1 (isolate N1) [[3d23]] | * Human coronavirus HKU1 (isolate N1) [[3d23]] | ||
* Human enterovirus [[3jau]] | |||
* Human enterovirus 71 (strain 7423/MS/87) [[3w95]] | * Human enterovirus 71 (strain 7423/MS/87) [[3w95]] | ||
* Human foamy virus [[4jmr]] | * Human foamy virus [[4jmr]] | ||
| Line 1,364: | Line 1,381: | ||
* Influenza A virus (A/Hong Kong/1035/1998(H1N1)) [[2lwa]] | * Influenza A virus (A/Hong Kong/1035/1998(H1N1)) [[2lwa]] | ||
* Influenza A virus (A/Hungary/2/1971(H3N2)) [[2kkz]] | * Influenza A virus (A/Hungary/2/1971(H3N2)) [[2kkz]] | ||
* Influenza A virus (A/Mexico/4603/2009(H1N1)) [[3mlh]] | * Influenza A virus (A/Mexico/4603/2009(H1N1)) [[3mlh]] | ||
* Influenza A virus (A/Mexico/InDRE4487/2009(H1N1)) [[3khw]] | * Influenza A virus (A/Mexico/InDRE4487/2009(H1N1)) [[3khw]] | ||
| Line 1,399: | Line 1,415: | ||
* Kupe virus [[4xzc]] | * Kupe virus [[4xzc]] | ||
* Lactobacillus phage J-1 [[5ly8]] | * Lactobacillus phage J-1 [[5ly8]] | ||
* Lagos bat lyssavirus [[2w2s]] | * Lagos bat lyssavirus [[2w2s]] | ||
* Lettuce necrotic yellows virus isolate 318 [[3t4r]] | * Lettuce necrotic yellows virus isolate 318 [[3t4r]] | ||
| Line 1,408: | Line 1,423: | ||
* Macaque simian foamy virus [[2jys]] | * Macaque simian foamy virus [[2jys]] | ||
* Maize chlorotic mottle virus [[3jb8]] | * Maize chlorotic mottle virus [[3jb8]] | ||
* Mammalian orthoreovirus 3 [[2cse]] | |||
* Meaban virus [[2oxt]] | * Meaban virus [[2oxt]] | ||
* Measles virus strain Edmonston [[3inb]] | * Measles virus strain Edmonston [[3inb]] | ||
| Line 1,445: | Line 1,461: | ||
* Panicum mosaic satellite virus [[1stm]] | * Panicum mosaic satellite virus [[1stm]] | ||
* Papaya mosaic virus [[4dox]] | * Papaya mosaic virus [[4dox]] | ||
* Penicillium chrysogenum virus (isolate Caston) [[3j3i]] | |||
* Penicillium stoloniferum virus F [[3es5]] | * Penicillium stoloniferum virus F [[3es5]] | ||
* Penicillium stoloniferum virus S [[3iym]] | * Penicillium stoloniferum virus S [[3iym]] | ||
| Line 1,457: | Line 1,474: | ||
* Prochlorococcus phage P-HM1 [[5hi8]] | * Prochlorococcus phage P-HM1 [[5hi8]] | ||
* Prochlorococcus phage P-SSP7 [[2xd8]] | * Prochlorococcus phage P-SSP7 [[2xd8]] | ||
* Propionibacterium phage PA6 [[3jb5]] | |||
* Pseudomonas phage LKA1 [[4ru4]] | * Pseudomonas phage LKA1 [[4ru4]] | ||
* Pseudomonas phage LUZ7 [[3pf6]] | * Pseudomonas phage LUZ7 [[3pf6]] | ||
| Line 1,464: | Line 1,482: | ||
* Pseudomonas phage phi297 [[4ru5]] | * Pseudomonas phage phi297 [[4ru5]] | ||
* Pseudomonas virus D3112 [[5uz9]] | * Pseudomonas virus D3112 [[5uz9]] | ||
* Pseudomonas virus Pf1 [[2xkm]] | |||
* Puumala orthohantavirus [[5fxu]] | * Puumala orthohantavirus [[5fxu]] | ||
* Rabbit picobirnavirus [[2vf1]] | * Rabbit picobirnavirus [[2vf1]] | ||
| Line 1,489: | Line 1,508: | ||
* SARS coronavirus TW1 [[2cjr]] | * SARS coronavirus TW1 [[2cjr]] | ||
* Saccharomyces cerevisiae virus L-A [[1m1c]] | * Saccharomyces cerevisiae virus L-A [[1m1c]] | ||
* Salmonella phage 9NA [[3riq]] | |||
* Salmonella phage P22-pbi [[2poh]] | * Salmonella phage P22-pbi [[2poh]] | ||
* Salmonella phage SETP3 [[4qbn]] | * Salmonella phage SETP3 [[4qbn]] | ||
| Line 1,505: | Line 1,525: | ||
* Southern bean mosaic virus [[4sbv]] | * Southern bean mosaic virus [[4sbv]] | ||
* St. Louis encephalitis virus [[4fg0]] | * St. Louis encephalitis virus [[4fg0]] | ||
* Staphylococcus phage 42D.m [[1bui]] | |||
* Staphylococcus virus 37 [[2p84]] | * Staphylococcus virus 37 [[2p84]] | ||
* Streptococcus phage P9 [[4qbo]] | * Streptococcus phage P9 [[4qbo]] | ||
| Line 1,510: | Line 1,531: | ||
* Streptomyces virus phiC31 [[4bqq]] | * Streptomyces virus phiC31 [[4bqq]] | ||
* Sulfolobus islandicus filamentous virus [[2h36]] | * Sulfolobus islandicus filamentous virus [[2h36]] | ||
* Synechococcus virus Syn5 [[4bml]] | |||
* TGEV virulent Purdue [[4f2m]] | * TGEV virulent Purdue [[4f2m]] | ||
* Tacaribe virus strain Franze-Fernandez [[4gve]] | * Tacaribe virus strain Franze-Fernandez [[4gve]] | ||
| Line 1,540: | Line 1,562: | ||
* Plasmid pMV158 [[5n2q]] | * Plasmid pMV158 [[5n2q]] | ||
* Ribosome display vector pRDV [[5en5]] | * Ribosome display vector pRDV [[5en5]] | ||
* synthetic gene [[2p0x]] | |||
==unclassified sequences== | ==unclassified sequences== | ||
* human gut metagenome [[4qay]] | * human gut metagenome [[4qay]] | ||
''Updated by [https://oca.weizmann.ac.il/oca OCA ] on Wed | ''Updated by [https://oca.weizmann.ac.il/oca OCA ] on Wed Mar 6 10:35:52 2019'' | ||
