Structure superposition tools: Difference between revisions
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===Dali=== | ===Dali=== | ||
"Dali does not optimize RMSD, it matches contacts" (Dali Tutorial, section 4.4.2). See the [http://en.wikipedia.org/wiki/Structural_alignment#DALI explanation of Dali's methods at Wikipedia]. | "Dali does not optimize RMSD, it matches contacts" (Dali Tutorial, section 4.4.2). See the [http://en.wikipedia.org/wiki/Structural_alignment#DALI explanation of Dali's methods at Wikipedia]. | ||
*Server: [http://ekhidna.biocenter.helsinki.fi/dali | *Server: [http://ekhidna.biocenter.helsinki.fi/dali Dali Server] | ||
*Publication (2010)<ref name="dali">PMID: 20457744</ref> | *Publication (2010)<ref name="dali">PMID: 20457744</ref> | ||
*Help on server: YES, including an extensive ''Dali Tutorial'' (PDF) with many screenshots. This refers to a ''Dali Manual'' which I could not find. | *Help on server: YES, including an extensive ''Dali Tutorial'' (PDF) with many screenshots. This refers to a ''Dali Manual'' which I could not find. | ||
