Lipase 3D Structures: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
Michal Harel (talk | contribs)
32,820 edits
No edit summary
Michal Harel (talk | contribs)
32,820 edits
No edit summary
Line 1: Line 1:
== 3D Structures of Lipase ==
== 3D Structures of Lipase ==


Line 7: Line 6:
*Eukaryote lipase:  
*Eukaryote lipase:  


**[[1hpl]] – hLip – horse <br />
**[[1hlg]] – hLip – human - gastric<br />
**[[1hlg]] – hLip – human - gastric<br />
**[[1jmy]] – hBSSL  <br />
**[[1jmy]] – hBSSL  <br />
**[[1akn]] – cBSSL – cattle <br />
**[[1hpl]] – hLip – horse <br />
**[[2bce]] - cBSSL (mutant) <br />
**[[1akn]] – bBSSL – bovine <br />
**[[1f6w]] - cBSSL – catalytic domain<br />
**[[2bce]] - bBSSL (mutant) <br />
**[[1f6w]] - bBSSL – catalytic domain<br />
**[[3o0d]] – Lip – ''Yarrowia lipolytica''<br />
**[[3o0d]] – Lip – ''Yarrowia lipolytica''<br />
**[[4jei]] – YlLip (mutant)<br />
**[[4jei]] – YlLip (mutant)<br />
**[[1gpl]] – Lip – Guinea pig<br />
**[[1gpl]] – Lip – Guinea pig<br />
**[[3zpx]] – Lip – ''Ustilago maydis''<br />
**[[3zpx]] – Lip – ''Ustilago maydis''<br />
**[[6a0w]] – Lip catalytic domain – bread mold<br />
**[[6a0w]], [[4l3w]] – Lip catalytic domain – bread mold<br />
**[[4zrd]], [[4zre]] – Lip1 (mutant) – dandruff fungus<br />
**[[4zrd]], [[4zre]] – Lip1 (mutant) – dandruff fungus<br />


Line 35: Line 34:
**[[1cvl]] – Lip – ''Chromobacterium viscosum''<br />
**[[1cvl]] – Lip – ''Chromobacterium viscosum''<br />
**[[1tic]] - Lip  – ''Rhizopus oryzae''<br />
**[[1tic]] - Lip  – ''Rhizopus oryzae''<br />
**[[3tgl]], [[4tgl]], [[1tgl]], [[6qpp]] – RmLip – ''Rhyzomucor miehei''<br />
**[[6qpr]] – RmLip (mutant)<br />
**[[2zvd]] – PsLip - ''Pseudomonas sp.'' – open state<br />
**[[2zvd]] – PsLip - ''Pseudomonas sp.'' – open state<br />
**[[2z8x]] - PsLip – extracellular<br />
**[[2z8x]] - PsLip – extracellular<br />
Line 79: Line 76:
**[[3icw]] – CaLipB (mutant) + phosphonate<br />
**[[3icw]] – CaLipB (mutant) + phosphonate<br />
**[[5x7k]] – SmLipB NBD <br />
**[[5x7k]] – SmLipB NBD <br />
**[[6isp]], [[6isq]], [[6isr]] – LipB (mutant) – ''Pseudozyma antarctica''<br />
**[[6isp]], [[6isq]], [[6isr]], [[6j1p]], [[6j1q]], [[6j1r]], [[6j1s]] – PaLipB (mutant) – ''Pseudozyma antarctica''<br />
**[[6j1t]] – PaLipB (mutant) + product analog<br />
**[[6tp8]] – PaLipB + substrate<br />
**[[6idy]] - AfLipB -  ''Aspergillus fumigatus''<br />
**[[6idy]] - AfLipB -  ''Aspergillus fumigatus''<br />


Line 97: Line 96:
**[[1evq]] – AaEst2(LIPE) – ''Alicyclobacillus acidocaldarius''<br />
**[[1evq]] – AaEst2(LIPE) – ''Alicyclobacillus acidocaldarius''<br />
**[[1u4n]] – AaEst2(LIPE) (mutant) <br />
**[[1u4n]] – AaEst2(LIPE) (mutant) <br />
**[[6keu]] – ElEstE53(HSL) – ''Erythrobacter longus''<br />
**[[6kf1]], [[6kf5]], [[6kf7]] – ElEstE53(HSL) (mutant)<br />


*Putative lipases; Proteins with unknown function but structural similarity to lipase obtained in structural genomics projects.  
*Putative lipases; Proteins with unknown function but structural similarity to lipase obtained in structural genomics projects.  
Line 153: Line 154:
**[[4zwn]] – yMAGL – yeast<br />
**[[4zwn]] – yMAGL – yeast<br />
**[[4zxf]] – yMAGLip + substrate analog<br />
**[[4zxf]] – yMAGLip + substrate analog<br />
**[[6eic]] – MAGLip – ''Mycobacterium tuberculosis''<br />
**[[6eic]], [[6k34]] – MAGLip – ''Mycobacterium tuberculosis''<br />
**[[5xk2]] – MAGLip – ''Aespergillus oryzae''<br />
**[[5xk2]] – MAGLip – ''Aespergillus oryzae''<br />
**[[6qe2]] – MAGLip – ''Plaeococcus ferrophilus''<br />
*Triacylglycerol lipase
**[[6or3]] –TlTAGLip + palmitate<br />
**[[3tgl]], [[4tgl]], [[1tgl]], [[6qpp]] – RmLip – ''Rhyzomucor miehei''<br />
**[[6qpr]] – RmLip (mutant)<br />


*Lipase with substrate bound at active site
*Lipase with substrate bound at active site
Line 174: Line 182:
*Lipase 2 or esterase/lipase
*Lipase 2 or esterase/lipase


**[[3v9a]],[[3g9t]], [[3g9u]], [[3g9z]], [[3h19]], [[3h1a]], [[3h1b]], [[3l1h]], [[3l1i]], [[3l1j]], [[3fak]], [[3h17]], [[3h18]], [[3dnm]], [[3k6k]] - E/L -  uncultured bacteria<br />
**[[3v9a]],[[3g9t]], [[3g9u]], [[3g9z]], [[3h19]], [[3h1a]], [[3h1b]], [[3l1h]], [[3l1i]], [[3l1j]], [[3fak]], [[3h17]], [[3h18]], [[3dnm]], [[3k6k]], [[6cl4]] - E/L -  uncultured bacteria<br />
**[[3w9b]] - CaE/L <br />
**[[3w9b]] - CaE/L <br />
**[[4v2i]] - E/L -  ''Thalassospira''<br />
**[[4v2i]] - E/L -  ''Thalassospira''<br />
Line 182: Line 190:
**[[4bzz]], [[4bzw]] - LpE/L <br />
**[[4bzz]], [[4bzw]] - LpE/L <br />
**[[6gup]] - AfE/L <br />
**[[6gup]] - AfE/L <br />
**[[6unv]] - E/L – ''Rasamsonia emersonii'' <br />
**[[1lgy]] – Lip2 – ''Rhizopus niveus''<br />
**[[1lgy]] – Lip2 – ''Rhizopus niveus''<br />
**[[1gz7]] - CrLip2 <br />
**[[1gz7]] - CrLip2 <br />
**[[4jei]] – Lip2 – ''Yarrowia lipolytica''<br />
**[[4jei]] – Lip2 – ''Yarrowia lipolytica''<br />
**[[1thg]] – Lip2 – ''Geotrichum candidum''<br />
**[[1thg]] – Lip2 – ''Geotrichum candidum''<br />
**[[6ksi]] – SaLip2 – ''Staphylococcus aureus''<br />
**[[6ksl]] – SaLip2 (mutant)<br />
**[[6ksm]] – SaLip2 + drug<br />
*Lipoprotein lipase
**[[6oau]], [[6e7k]], [[6oaz]], [[6ob0]] – hLPL + GPIHBP1<br />
**[[6u7m]] – bLPL – Cryo EM<br />
}}
}}




[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 07:55, 1 September 2020

3D Structures of Lipase

Updated on 01-September-2020

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

Retrieved from "https://proteopedia.org/index.php?title=Lipase_3D_Structures&oldid=3285579"