5kja: Difference between revisions

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<StructureSection load='5kja' size='340' side='right'caption='[[5kja]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='5kja' size='340' side='right'caption='[[5kja]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5kja]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Syny3 Syny3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KJA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KJA FirstGlance]. <br>
<table><tr><td colspan='2'>[[5kja]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803_substr._Kazusa Synechocystis sp. PCC 6803 substr. Kazusa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KJA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KJA FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5kk0|5kk0]], [[5kjb|5kjb]], [[5kjd|5kjd]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sll1541 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1111708 SYNY3])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5kja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kja OCA], [https://pdbe.org/5kja PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5kja RCSB], [https://www.ebi.ac.uk/pdbsum/5kja PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5kja ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/All-trans-8'-apo-beta-carotenal_15,15'-oxygenase All-trans-8'-apo-beta-carotenal 15,15'-oxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.75 1.13.11.75] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kja OCA], [http://pdbe.org/5kja PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kja RCSB], [http://www.ebi.ac.uk/pdbsum/5kja PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kja ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/ACOX_SYNY3 ACOX_SYNY3]] Cleaves a number of carotenals and carotenols in the all-trans configuration at the 15-15' double bond producing retinal or retinol, respectively. Also shows activity toward lycopenals and the corresponding alcohols. Does not cleave beta-carotene or lycopene.  
[https://www.uniprot.org/uniprot/ACOX_SYNY3 ACOX_SYNY3] Cleaves a number of carotenals and carotenols in the all-trans configuration at the 15-15' double bond producing retinal or retinol, respectively. Also shows activity toward lycopenals and the corresponding alcohols. Does not cleave beta-carotene or lycopene.
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== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: All-trans-8'-apo-beta-carotenal 15,15'-oxygenase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Syny3]]
[[Category: Synechocystis sp. PCC 6803 substr. Kazusa]]
[[Category: Kiser, P D]]
[[Category: Kiser PD]]
[[Category: Palczewski, K]]
[[Category: Palczewski K]]
[[Category: Sui, X]]
[[Category: Sui X]]
[[Category: Active site]]
[[Category: Carotenoid binding]]
[[Category: Iron-coordination]]
[[Category: Ligand interaction]]
[[Category: Mutagenesis]]
[[Category: Non-heme iron]]
[[Category: Oxidoreductase]]