5vx4: Difference between revisions

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<StructureSection load='5vx4' size='340' side='right'caption='[[5vx4]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
<StructureSection load='5vx4' size='340' side='right'caption='[[5vx4]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5vx4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Group_a_rotaviruses Group a rotaviruses]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VX4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VX4 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5vx4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rotavirus_A Rotavirus A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VX4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VX4 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vx4 OCA], [http://pdbe.org/5vx4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vx4 RCSB], [http://www.ebi.ac.uk/pdbsum/5vx4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vx4 ProSAT]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vx4 OCA], [https://pdbe.org/5vx4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vx4 RCSB], [https://www.ebi.ac.uk/pdbsum/5vx4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vx4 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/Q2VE61_9REOV Q2VE61_9REOV]] Outer capsid protein VP5*: Forms the spike "foot" and "body" and acts as a membrane permeabilization protein that mediates release of viral particles from endosomal compartments into the cytoplasm. During entry, the part of VP5* that protrudes from the virus folds back on itself and reorganizes from a local dimer to a trimer. This reorganization may be linked to membrane penetration by exposing VP5* hydrophobic region. In integrin-dependent strains, VP5* targets the integrin heterodimer ITGA2/ITGB1 for cell attachment.[SAAS:SAAS01043052]  
[https://www.uniprot.org/uniprot/Q2VE61_9VIRU Q2VE61_9VIRU]  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5vx4" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5vx4" style="background-color:#fffaf0;"></div>
==See Also==
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Group a rotaviruses]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Hu, L]]
[[Category: Rotavirus A]]
[[Category: Prasad, B V.Venkataram]]
[[Category: Hu L]]
[[Category: Glycan]]
[[Category: Venkataram Prasad BV]]
[[Category: Hbga]]
[[Category: Rotavirus]]
[[Category: Viral protein]]
Retrieved from "https://proteopedia.org/5vx4"