Thiolase: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Michal Harel (talk | contribs)
No edit summary
Michal Harel (talk | contribs)
No edit summary
Line 11: Line 11:
== Structural highlights ==
== Structural highlights ==
The <scene name='44/447919/Cv/8'>active site of 3-ketoacyl-CoA thiolase contains CoA</scene><ref>PMID:25478839</ref>. Water molecules are shown as red spheres.
The <scene name='44/447919/Cv/8'>active site of 3-ketoacyl-CoA thiolase contains CoA</scene><ref>PMID:25478839</ref>. Water molecules are shown as red spheres.
== 3D Structures of Thiolase ==
[[Thiolase 3D structures]]
</StructureSection>
</StructureSection>
== 3D Structures of Thiolase ==
== 3D Structures of Thiolase ==
Line 19: Line 22:
*3-ketoacyl-CoA thiolase
*3-ketoacyl-CoA thiolase


**[[2wu9]], [[2c7y]], [[2c7z]] – KCT peroxisomal residues 36-462 – ''Arabidopsis thaliana''<br />
**[[2wua]] - KCT peroxisomal residues 17-449 (mutant) – sunflower<br />
**[[2iik]] – hKCT peroxisomal – human<br />
**[[2iik]] – hKCT peroxisomal – human<br />
**[[4c2k]] – hKCT mitochondrial <br />
**[[4c2k]] – hKCT mitochondrial <br />
**[[4c2j]] – hKCT mitochondrial + CoA<br />
**[[4c2j]] – hKCT mitochondrial + CoA<br />
**[[2wu9]], [[2c7y]], [[2c7z]] – KCT peroxisomal residues 36-462 – ''Arabidopsis thaliana''<br />
**[[2wua]] - KCT peroxisomal residues 17-449 (mutant) – sunflower<br />
**[[1afw]], [[1pxt]] – yKCT peroxisomal – yeast<br />
**[[3goa]] – KCT – ''Salmonella typhimurium''<br />
**[[3goa]] – KCT – ''Salmonella typhimurium''<br />
**[[5lp7]] – KCT – ''Bacillus subtilis'' <br />
**[[5lp7]] – KCT – ''Bacillus subtilis'' <br />
**[[1afw]], [[1pxt]] – yKCT peroxisomal – yeast<br />
**[[5cbq]] – MsKCT – ''Mycobacterium smegmatis'' <br />
**[[5cbq]] – MsKCT – ''Mycobacterium smegmatis'' <br />
**[[4w61]] – ReKCT – ''Ralstonia eutropha''<br />
**[[4w61]] – ReKCT – ''Ralstonia eutropha''<br />
Line 43: Line 46:
*Acetoacetyl-CoA thiolase or acetyl-CoA acetyltransferase
*Acetoacetyl-CoA thiolase or acetyl-CoA acetyltransferase


**[[2ib7]], [[2ib8]], [[2ib9]], [[2ibu]], [[2ibw]], [[2iby]], [[2f2s]] – hACT mitochondrial<br />
**[[1wl5]] - hACT cytosolic<br />
**[[5xyj]], [[5xz5]] – yACT <br />
**[[1m4s]], [[1m4t]], [[1dlu]], [[1qfl]] - ZrACT – ''Zoogloea ramigera''<br />
**[[1m4s]], [[1m4t]], [[1dlu]], [[1qfl]] - ZrACT – ''Zoogloea ramigera''<br />
**[[2wku]], [[2wl6]], [[1m1t]], [[1m3k]] - ZrACT (mutant) <br />
**[[2wku]], [[2wl6]], [[1m1t]], [[1m3k]] - ZrACT (mutant) <br />
**[[2ib7]], [[2ib8]], [[2ib9]], [[2ibu]], [[2ibw]], [[2iby]], [[2f2s]] – hACT mitochondrial<br />
**[[1wl5]] - hACT cytosolic<br />
**[[4dd5]], [[4e1l]] – ACT – ''Clostridium difficile''<br />
**[[4dd5]], [[4e1l]] – ACT – ''Clostridium difficile''<br />
**[[4xl2]], [[4xl3]], [[4n44]], [[4n45]] – CaACT – ''Clostridium acetobutylicum''<br />
**[[4xl2]], [[4xl3]], [[4n44]], [[4n45]] – CaACT – ''Clostridium acetobutylicum''<br />
Line 52: Line 56:
**[[5f0v]], [[5f38]], [[4wys]] – ACT – ''Escherichia coli'' <br />
**[[5f0v]], [[5f38]], [[4wys]] – ACT – ''Escherichia coli'' <br />
**[[4o9a]], [[4o99]], [[4o9c]], [[4nzs]] – ReACT <br />
**[[4o9a]], [[4o99]], [[4o9c]], [[4nzs]] – ReACT <br />
**[[5xyj]], [[5xz5]] – yACT <br />


*Acetoacetyl-CoA thiolase complex
*Acetoacetyl-CoA thiolase complex


**[[1wl4]] – hACT cytosolic + CoA <br />
**[[1dm3]], [[1dlv]] – ZrACT + CoA<br />
**[[1dm3]], [[1dlv]] – ZrACT + CoA<br />
**[[2wkt]], [[2wkv]], [[2wl4]], [[2wl5]], [[2vtz]], [[1m3z]] – ZrACT (mutant) + CoA<br />
**[[2wkt]], [[2wkv]], [[2wl4]], [[2wl5]], [[2vtz]], [[1m3z]] – ZrACT (mutant) + CoA<br />
Line 61: Line 65:
**[[2vu0]], [[1nl7]] - ZrACT + CoA<br />
**[[2vu0]], [[1nl7]] - ZrACT + CoA<br />
**[[2vu1]], [[2vu2]], [[1ou6]] - ZrACT + pantheteine-11-pivalate<br />
**[[2vu1]], [[2vu2]], [[1ou6]] - ZrACT + pantheteine-11-pivalate<br />
**[[1wl4]] – hACT cytosolic + CoA <br />
**[[4xl4]] – CaACT + CoA <br />
**[[4xl4]] – CaACT + CoA <br />
**[[6et9]] – MtACT + PFAM DUF35 + hydroxymethylglutaryl-CoA synthase - ''Methanothermococcus thermolithotrophicus''<br />
**[[6et9]] – MtACT + PFAM DUF35 + hydroxymethylglutaryl-CoA synthase - ''Methanothermococcus thermolithotrophicus''<br />
**[[6esq]] – MtACT + CoA + PFAM DUF35 + hydroxymethylglutaryl-CoA synthase <br />
**[[6esq]] – MtACT + CoA + PFAM DUF35 + hydroxymethylglutaryl-CoA synthase <br />
**[[6are]] – ACT + CoA + acetate - ''Aspergillus fumigatus'' <br />
**[[6are]] – ACT + CoA + acetate - ''Aspergillus fumigatus'' <br />
*SCP2-thiolase
**]]6hrv]] – zfSCP2 - zebrafish <br />
**]]6hsj]] – zfSCP2 + CoA<br />
**]]6hsp]] – zfSCP2 + CoA + octanoyl-CoA<br />
}}
}}
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 11:01, 20 February 2020

Human 3-ketoacyl-CoA complex with CoA and ethylene glycol(PDB code 4c2j).

Drag the structure with the mouse to rotate

3D Structures of Thiolase

Updated on 20-February-2020

References

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman