|
|
| Line 19: |
Line 19: |
|
| |
|
| </StructureSection> | | </StructureSection> |
|
| |
| ==3D structures of transposase==
| |
|
| |
| Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
| |
| {{#tree:id=OrganizedByTopic|openlevels=0|
| |
|
| |
| *Mu transposase
| |
|
| |
| **[[1tns]], [[1tnt]] – MuMuA DNA-binding domain – enterobacteria phage Mu - NMR<br />
| |
| **[[1bcm]], [[1bco]] – MuMuA core domain <br />
| |
| **[[2ezh]], [[2ezi]] – MuMuA Iγ subdomain - NMR<br />
| |
| **[[2ezk]], [[2ezl]] – MuMuA Iβ subdomain - NMR<br />
| |
| **[[4fcy]] – MuMuA + DNA <br />
| |
|
| |
| *Hermes transposase
| |
|
| |
| **[[2bw3]] – fTra (mutant) - fly<br />
| |
| **[[4d1q]], [[6dx0]], [[6dww]], [[6dwy]], [[6dwz]] – fTra (mutant) + DNA <br />
| |
|
| |
| *Dra2 transposase
| |
|
| |
| **[[2xm3]] – Dra2 + Dra2 transposase binding element + DNA – ''Deinococcus radiodurans'' <br />
| |
| **[[2xma]], [[2xqc]] – Dra2 + DNA <br />
| |
| **[[2xo6]] – Dra2 (mutant) + DNA <br />
| |
|
| |
| *Tn5 transposase
| |
|
| |
| **[[1muh]], [[1mus]], [[1mm8]], [[3ecp]], [[4dm0]] – EcTn5 (mutant) + DNA – ''Escherichia coli''<br />
| |
|
| |
| *Tn7 transposase
| |
|
| |
| **[[5d17]] – EcTn7 C terminal <br />
| |
| **[[5d16]] – EcTn7 C terminal (mutant) <br />
| |
|
| |
| *Mos1 transposase
| |
|
| |
| **[[2f7t]] – DmMos1 catalytic domain (mutant) – ''Drosophila mauritiana''<br />
| |
| **[[4u7b]], [[5hoo]] – DmMos1 + DNA <br />
| |
| **[[3hos]], [[3hot]], [[4r79]] – DmMos1 (mutant) + DNA <br />
| |
| **[[4mda]], [[4mdb]] – DmMos1 catalytic domain (mutant) + drug<br />
| |
|
| |
| *Tc3 transposase
| |
|
| |
| **[[1tc3]], [[1u78]] – Tc3 DNA-binding domain (mutant) + DNA – ''Caenorhabditis elegans''<br />
| |
|
| |
| *Orfa transposase (Is608)
| |
|
| |
| **[[2a6m]] – HpOrfa – ''Helicobacter pylori''<br />
| |
| **[[2vhg]], [[2a6o]], [[2vic]], [[2vih]], [[2vju]], [[2vjv]] – HpOrfa + DNA <br />
| |
|
| |
| *Sleeping beauty transposase
| |
|
| |
| **[[5cr4]] – SB catalytic domain – synthetic<br />
| |
| **[[2m8e]] – SB PAI domain – synthetic - NMR<br />
| |
| **[[5unk]] – RED domain – ''Oncorhynchus mykiss'' - NMR<br />
| |
|
| |
| *DNA-mediated transposase
| |
|
| |
| **[[6pqr]], [[6pqu]], [[6pqx]], [[6pr5]] – DMT – corn earthworm moth – Cryo EM<br />
| |
|
| |
| *P element transposase
| |
|
| |
| **[[6pe2]], [[6p5a]] – DmPET + DNA – Cryo EM<br />
| |
| **[[3kde]] – DmPET THAP domain + DNA <br />
| |
|
| |
| *Piggyback transposase
| |
|
| |
| **[[5lme]] – PBT C terminal – cabbage looper - NMR<br />
| |
| }}
| |
|
| |
|
| == References == | | == References == |