5t2a: Difference between revisions

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<SX load='5t2a' size='340' side='right' viewer='molstar' caption='[[5t2a]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
<SX load='5t2a' size='340' side='right' viewer='molstar' caption='[[5t2a]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5t2a]] is a 79 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_donovani Leishmania donovani]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T2A OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5T2A FirstGlance]. <br>
<table><tr><td colspan='2'>[[5t2a]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_donovani Leishmania donovani]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T2A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5T2A FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5t2c|5t2c]]</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5t2a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t2a OCA], [http://pdbe.org/5t2a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5t2a RCSB], [http://www.ebi.ac.uk/pdbsum/5t2a PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5t2a ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5t2a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t2a OCA], [https://pdbe.org/5t2a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5t2a RCSB], [https://www.ebi.ac.uk/pdbsum/5t2a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5t2a ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/RL37_LEIDO RL37_LEIDO]] Binds to the 23S rRNA.
[https://www.uniprot.org/uniprot/E9BUI1_LEIDB E9BUI1_LEIDB]  
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The recent success in ribosome structure determination by cryoEM has opened the door to defining structural differences between ribosomes of pathogenic organisms and humans and to understand ribosome-targeting antibiotics. Here, by direct electron-counting cryoEM, we have determined the structures of the Leishmania donovani and human ribosomes at 2.9 A and 3.6 A, respectively. Our structure of the leishmanial ribosome elucidates the organization of the six fragments of its large subunit rRNA (as opposed to a single 28S rRNA in most eukaryotes, including humans) and reveals atomic details of a unique 20 amino acid extension of the uL13 protein that pins down the ends of three of the rRNA fragments. The structure also fashions many large rRNA expansion segments. Direct comparison of our human and leishmanial ribosome structures at the decoding A-site sheds light on how the bacterial ribosome-targeting drug paromomycin selectively inhibits the eukaryotic L. donovani, but not human, ribosome.
 
Structures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes.,Zhang X, Lai M, Chang W, Yu I, Ding K, Mrazek J, Ng HL, Yang OO, Maslov DA, Zhou ZH Nat Commun. 2016 Oct 18;7:13223. doi: 10.1038/ncomms13223. PMID:27752045<ref>PMID:27752045</ref>
 
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 5t2a" style="background-color:#fffaf0;"></div>


==See Also==
==See Also==
*[[Receptor for activated protein kinase C 1|Receptor for activated protein kinase C 1]]
*[[Ribosome 3D structures|Ribosome 3D structures]]
*[[Ribosome 3D structures|Ribosome 3D structures]]
== References ==
*[[3D sructureseceptor for activated protein kinase C 1|3D sructureseceptor for activated protein kinase C 1]]
<references/>
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[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Leishmania donovani]]
[[Category: Leishmania donovani]]
[[Category: Lai, M]]
[[Category: Lai M]]
[[Category: Zhang, X]]
[[Category: Zhang X]]
[[Category: Zhou, Z H]]
[[Category: Zhou ZH]]
[[Category: Ribosome]]

Latest revision as of 15:35, 6 March 2024

CryoEM structure of the Leishmania donovani 80S ribosome at 2.9 Angstrom resolution

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