6rx4: Difference between revisions

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<SX load='6rx4' size='340' side='right' viewer='molstar' caption='[[6rx4]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
<SX load='6rx4' size='340' side='right' viewer='molstar' caption='[[6rx4]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6rx4]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli] and [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RX4 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6RX4 FirstGlance]. <br>
<table><tr><td colspan='2'>[[6rx4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RX4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RX4 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HDD:CIS-HEME+D+HYDROXYCHLORIN+GAMMA-SPIROLACTONE'>HDD</scene>, <scene name='pdbligand=HEB:HEME+B/C'>HEB</scene>, <scene name='pdbligand=PEE:1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE'>PEE</scene>, <scene name='pdbligand=UQ8:UBIQUINONE-8'>UQ8</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HDD:CIS-HEME+D+HYDROXYCHLORIN+GAMMA-SPIROLACTONE'>HDD</scene>, <scene name='pdbligand=HEB:HEME+B/C'>HEB</scene>, <scene name='pdbligand=PEE:1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE'>PEE</scene>, <scene name='pdbligand=UQ8:UBIQUINONE-8'>UQ8</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ubiquinol_oxidase_(electrogenic,_proton-motive_force_generating) Ubiquinol oxidase (electrogenic, proton-motive force generating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=7.1.1.7 7.1.1.7] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rx4 OCA], [https://pdbe.org/6rx4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rx4 RCSB], [https://www.ebi.ac.uk/pdbsum/6rx4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rx4 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6rx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rx4 OCA], [http://pdbe.org/6rx4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rx4 RCSB], [http://www.ebi.ac.uk/pdbsum/6rx4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rx4 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/CYDA_ECOLI CYDA_ECOLI]] A terminal oxidase that produces a proton motive force by the vectorial transfer of protons across the inner membrane. It is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at low aeration. Generates a proton motive force using protons and electrons from opposite sides of the membrane to generate H(2)O, transferring 1 proton/electron.<ref>PMID:19542282</ref> <ref>PMID:21987791</ref> <ref>PMID:2656671</ref> <ref>PMID:6307994</ref> <ref>PMID:7577938</ref> [[http://www.uniprot.org/uniprot/CYDX_ECOLI CYDX_ECOLI]] Required for correct functioning of cytochrome bd-I oxidase. This protein and AppX may have some functional overlap. [[http://www.uniprot.org/uniprot/CYDB_ECOLI CYDB_ECOLI]] A terminal oxidase that produces a proton motive force by the vectorial transfer of protons across the inner membrane. It is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at low aeration. Generates a proton motive force using protons and electrons from opposite sides of the membrane to generate H(2)O, transferring 1 proton/electron.<ref>PMID:19542282</ref> <ref>PMID:21987791</ref> <ref>PMID:6307994</ref> 
[https://www.uniprot.org/uniprot/CYDA_ECOLI CYDA_ECOLI] A terminal oxidase that produces a proton motive force by the vectorial transfer of protons across the inner membrane. It is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at low aeration. Generates a proton motive force using protons and electrons from opposite sides of the membrane to generate H(2)O, transferring 1 proton/electron.<ref>PMID:19542282</ref> <ref>PMID:21987791</ref> <ref>PMID:2656671</ref> <ref>PMID:6307994</ref> <ref>PMID:7577938</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6rx4" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6rx4" style="background-color:#fffaf0;"></div>
==See Also==
*[[Cytochrome bd oxidase|Cytochrome bd oxidase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</SX>
</SX>
[[Category: Ecoli]]
[[Category: Escherichia coli K-12]]
[[Category: Escherichia coli k-12]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Boettcher, B]]
[[Category: Boettcher B]]
[[Category: Friedrich, T]]
[[Category: Friedrich T]]
[[Category: Rasmussen, T]]
[[Category: Rasmussen T]]
[[Category: Thesseling, A]]
[[Category: Thesseling A]]
[[Category: Bd oxidase]]
[[Category: Oxidoreductase]]
[[Category: Terminal oxidase]]
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