5fh6: Difference between revisions

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<StructureSection load='5fh6' size='340' side='right'caption='[[5fh6]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='5fh6' size='340' side='right'caption='[[5fh6]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5fh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FH6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5FH6 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5fh6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FH6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FH6 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5XM:(3~{R})-3-(PIPERIDIN-1-YLMETHYL)-2,3-DIHYDRO-1~{H}-PYRROLO[1,2-A]QUINAZOLIN-5-ONE'>5XM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PBRM1, BAF180, PB1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5XM:(3~{R})-3-(PIPERIDIN-1-YLMETHYL)-2,3-DIHYDRO-1~{H}-PYRROLO[1,2-A]QUINAZOLIN-5-ONE'>5XM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5fh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fh6 OCA], [http://pdbe.org/5fh6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fh6 RCSB], [http://www.ebi.ac.uk/pdbsum/5fh6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fh6 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fh6 OCA], [https://pdbe.org/5fh6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fh6 RCSB], [https://www.ebi.ac.uk/pdbsum/5fh6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fh6 ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
[[http://www.uniprot.org/uniprot/PB1_HUMAN PB1_HUMAN]] Defects in PBRM1 are a cause of renal cell carcinoma (RCC) [MIM:[http://omim.org/entry/144700 144700]]. It is a heterogeneous group of sporadic or hereditary carcinoma derived from cells of the proximal renal tubular epithelium. It is subclassified into clear cell renal carcinoma (non-papillary carcinoma), papillary renal cell carcinoma, chromophobe renal cell carcinoma, collecting duct carcinoma with medullary carcinoma of the kidney, and unclassified renal cell carcinoma.<ref>PMID:21248752</ref>
[https://www.uniprot.org/uniprot/PB1_HUMAN PB1_HUMAN] Defects in PBRM1 are a cause of renal cell carcinoma (RCC) [MIM:[https://omim.org/entry/144700 144700]. It is a heterogeneous group of sporadic or hereditary carcinoma derived from cells of the proximal renal tubular epithelium. It is subclassified into clear cell renal carcinoma (non-papillary carcinoma), papillary renal cell carcinoma, chromophobe renal cell carcinoma, collecting duct carcinoma with medullary carcinoma of the kidney, and unclassified renal cell carcinoma.<ref>PMID:21248752</ref>  
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/PB1_HUMAN PB1_HUMAN]] Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Acts as a negative regulator of cell proliferation.<ref>PMID:21248752</ref>
[https://www.uniprot.org/uniprot/PB1_HUMAN PB1_HUMAN] Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Acts as a negative regulator of cell proliferation.<ref>PMID:21248752</ref>  
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<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Arrowsmith, C H]]
[[Category: Arrowsmith CH]]
[[Category: Bountra, C]]
[[Category: Bountra C]]
[[Category: Brennan, P E]]
[[Category: Brennan PE]]
[[Category: Delft, F von]]
[[Category: Edwards AM]]
[[Category: Edwards, A M]]
[[Category: Fedorov O]]
[[Category: Fedorov, O]]
[[Category: Fonseca M]]
[[Category: Fonseca, M]]
[[Category: Knapp S]]
[[Category: Knapp, S]]
[[Category: Krojer T]]
[[Category: Krojer, T]]
[[Category: Ley SV]]
[[Category: Ley, S V]]
[[Category: Picaud S]]
[[Category: Picaud, S]]
[[Category: Siejka P]]
[[Category: Siejka, P]]
[[Category: Sutherell CL]]
[[Category: Sutherell, C L]]
[[Category: Tallant C]]
[[Category: Tallant, C]]
[[Category: Von Delft F]]
[[Category: Brg1-associated factor 180]]
[[Category: Chromatin remodeling]]
[[Category: Pbrm1]]
[[Category: Transcription]]