5iv9: Difference between revisions

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<StructureSection load='5iv9' size='340' side='right'caption='[[5iv9]], [[Resolution|resolution]] 4.37&Aring;' scene=''>
<StructureSection load='5iv9' size='340' side='right'caption='[[5iv9]], [[Resolution|resolution]] 4.37&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5iv9]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV9 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5IV9 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5iv9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IV9 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4.369&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5iva|5iva]], [[5iv8|5iv8]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">imp, lptD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886]), lptE, APU20_03225 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5iv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv9 OCA], [https://pdbe.org/5iv9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5iv9 RCSB], [https://www.ebi.ac.uk/pdbsum/5iv9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5iv9 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5iv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv9 OCA], [http://pdbe.org/5iv9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iv9 RCSB], [http://www.ebi.ac.uk/pdbsum/5iv9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iv9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/C4T9I0_KLEPN C4T9I0_KLEPN]] Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.[HAMAP-Rule:MF_01411][SAAS:SAAS00542435] [[http://www.uniprot.org/uniprot/A0A0J4W1Y0_KLEPN A0A0J4W1Y0_KLEPN]] Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.[HAMAP-Rule:MF_01186][SAAS:SAAS00074338]  
[https://www.uniprot.org/uniprot/C4T9I0_KLEPN C4T9I0_KLEPN] Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.[HAMAP-Rule:MF_01411][SAAS:SAAS00542435]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Klebsiella pneumoniae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Botos, I]]
[[Category: Botos I]]
[[Category: Buchanan, S K]]
[[Category: Buchanan SK]]
[[Category: McCarthy, J G]]
[[Category: McCarthy JG]]
[[Category: Lipopolysaccharide]]
[[Category: Lptd]]
[[Category: Lpte]]
[[Category: Transport protein]]
[[Category: Transporter]]

Latest revision as of 10:33, 6 September 2023

The LPS Transporter LptDE from Klebsiella pneumoniae, full-length

5iv9, resolution 4.37Å

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