5l83: Difference between revisions

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<StructureSection load='5l83' size='340' side='right'caption='[[5l83]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='5l83' size='340' side='right'caption='[[5l83]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5l83]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Potato Potato]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L83 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5L83 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5l83]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Phytophthora_infestans Phytophthora infestans] and [https://en.wikipedia.org/wiki/Solanum_tuberosum Solanum tuberosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L83 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5L83 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PGSC0003DMG402022314, PGSC0003DMG400014422 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4113 Potato])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5l83 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l83 OCA], [http://pdbe.org/5l83 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5l83 RCSB], [http://www.ebi.ac.uk/pdbsum/5l83 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5l83 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5l83 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l83 OCA], [https://pdbe.org/5l83 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5l83 RCSB], [https://www.ebi.ac.uk/pdbsum/5l83 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5l83 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/ATG8C_SOLTU ATG8C_SOLTU] Ubiquitin-like modifier involved in autophagosomes formation (Probable). May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton (Probable). ATG8CL-mediated selective autophagy contributes to defense against the fungal pathogen Phytophtora infestans (PubMed:26765567, PubMed:29932422).<ref>PMID:26765567</ref> <ref>PMID:29932422</ref> <ref>PMID:26765567</ref> <ref>PMID:29932422</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Potato]]
[[Category: Phytophthora infestans]]
[[Category: Banfield, M J]]
[[Category: Solanum tuberosum]]
[[Category: Hughes, R K]]
[[Category: Banfield MJ]]
[[Category: Maqbool, A]]
[[Category: Hughes RK]]
[[Category: Atg8 interacting moif]]
[[Category: Maqbool A]]
[[Category: Autophagy-related protein 8]]
[[Category: Effector protein]]
[[Category: Immune system]]

Latest revision as of 16:10, 4 October 2023

Complex of potato ATG8 protein with a peptide from Irish potato famine pathogen effector protein PexRD54

5l83, resolution 1.90Å

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