1ccn: Difference between revisions

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[[Image:1ccn.~~jpg~~|left|200px]]

[[Image:1ccn.png|left|200px]]

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~~'''~~DIRECT NOE REFINEMENT OF CRAMBIN FROM 2D NMR DATA USING A SLOW-COOLING ANNEALING PROTOCOL~~'''~~

===DIRECT NOE REFINEMENT OF CRAMBIN FROM 2D NMR DATA USING A SLOW-COOLING ANNEALING PROTOCOL===

~~==Overview==~~

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~~A set of computer programs called DINOSAUR has been developed~~, ~~which allows the refinement of biomolecular structures directly from 2D NOE intensities. The NOE restraining potential implemented emphasises~~ the ~~weak intensities corresponding~~ to ~~larger distances which are more likely to determine~~ the ~~three-dimensional structure~~. ~~An approximation based on a two-spin approximation~~ is ~~proposed for~~ the ~~gradient of the NOE intensities instead of the exact solution which is extremely time~~-~~consuming. The DINOSAUR routines have been implemented in various refinement programs (Distance bound Driven Dynamics, Molecular Dynamics and Energy Minimisation) and tested on an eight~~-~~residue model peptide.~~

The line below this paragraph, {{ABSTRACT_PUBMED_1841701}}, adds the Publication Abstract to the page

(as it appears on PubMed at http://www.pubmed.gov), where 1841701 is the PubMed ID number.

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==About this Structure==

1CCN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Crambe_hispanica_subsp._abyssinica Crambe hispanica subsp. abyssinica]. Full ~~crystallographic~~ information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CCN OCA].

1CCN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Crambe_hispanica_subsp._abyssinica Crambe hispanica subsp. abyssinica]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CCN OCA].

==Reference==

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[[Category: Rullmann, J A.C.]]

[[Category: Plant seed protein]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Fri May 2 12~~:35:16 2008''

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 20:33:42 2008''

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-[[Image:1ccn.jpg|left|200px]]
+{{Seed}}
+[[Image:1ccn.png|left|200px]]
 <!--
@@ Line 9: / Line 10: @@
 {{STRUCTURE_1ccn|  PDB=1ccn  |  SCENE=  }}
-'''DIRECT NOE REFINEMENT OF CRAMBIN FROM 2D NMR DATA USING A SLOW-COOLING ANNEALING PROTOCOL'''
+===DIRECT NOE REFINEMENT OF CRAMBIN FROM 2D NMR DATA USING A SLOW-COOLING ANNEALING PROTOCOL===
-==Overview==
+<!--
-A set of computer programs called DINOSAUR has been developed, which allows the refinement of biomolecular structures directly from 2D NOE intensities. The NOE restraining potential implemented emphasises the weak intensities corresponding to larger distances which are more likely to determine the three-dimensional structure. An approximation based on a two-spin approximation is proposed for the gradient of the NOE intensities instead of the exact solution which is extremely time-consuming. The DINOSAUR routines have been implemented in various refinement programs (Distance bound Driven Dynamics, Molecular Dynamics and Energy Minimisation) and tested on an eight-residue model peptide.
+The line below this paragraph, {{ABSTRACT_PUBMED_1841701}}, adds the Publication Abstract to the page
+(as it appears on PubMed at http://www.pubmed.gov), where 1841701 is the PubMed ID number.
+-->
+{{ABSTRACT_PUBMED_1841701}}
 ==About this Structure==
-CCN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Crambe_hispanica_subsp._abyssinica Crambe hispanica subsp. abyssinica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CCN OCA].
+CCN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Crambe_hispanica_subsp._abyssinica Crambe hispanica subsp. abyssinica]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CCN OCA].
 ==Reference==
@@ Line 28: / Line 32: @@
 [[Category: Rullmann, J A.C.]]
 [[Category: Plant seed protein]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 12:35:16 2008''
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 20:33:42 2008''