Hydroxylases 3D structures: Difference between revisions
From Proteopedia
Jump to navigationJump to search
Michal Harel (talk | contribs) No edit summary |
Michal Harel (talk | contribs) No edit summary |
||
| Line 14: | Line 14: | ||
**[[1j8u]] - hPAH catalytic domain + cofactor<br /> | **[[1j8u]] - hPAH catalytic domain + cofactor<br /> | ||
**[[1dmw]] - hPAH catalytic domain + cofactor<br /> | **[[1dmw]] - hPAH catalytic domain + cofactor<br /> | ||
**[[1tg2]], [[1lrm]] - hPAH catalytic domain (mutant) + cofactor<br /> | **[[1tg2]], [[1lrm]] - hPAH catalytic domain (mutant) + cofactor<br /> | ||
**[[1mmk]], [[1mmt]], [[1kw0]] - hPAH catalytic domain + cofactor + substrate<br /> | **[[1mmk]], [[1mmt]], [[1kw0]] - hPAH catalytic domain + cofactor + substrate<br /> | ||
| Line 39: | Line 38: | ||
**[[2xsn]] – hTH catalytic domain <br /> | **[[2xsn]] – hTH catalytic domain <br /> | ||
**[2toh]], [[1toh]] – TH catalytic and tetramerization domains - rat | **[2toh]], [[1toh]] – TH catalytic and tetramerization domains - rat<br /> | ||
**[[7kqr]], [[7kqs]], [[7kqt]], [[7kqu]] – TH + heme + Tyr derivative – ''Streptomyces sclerotialus'' <br /> | |||
*Tryptophan hydroxylase | *Tryptophan hydroxylase | ||
| Line 60: | Line 60: | ||
**[[1pdh]] – PfPHBH + FAD derivative + PHB <br /> | **[[1pdh]] – PfPHBH + FAD derivative + PHB <br /> | ||
**[[1cj2]], [[1cj3]], [[1cj4]] – PfPHBH (mutant) + FAD derivative + PHB <br /> | **[[1cj2]], [[1cj3]], [[1cj4]] – PfPHBH (mutant) + FAD derivative + PHB <br /> | ||
**[[1dod]], [[1doe]] – PaPHBH + FAD + | **[[1dob]], [[1doc]], [[1pxa]], [[1pxb]], [[1pxc]] – PaPHBH + FAD + PHB – ''Pseudomonas aeruginosa''<br /> | ||
**[[1dod]], [[1doe]], [[1iuv]], [[1iuw]], [[1iux]] – PaPHBH + FAD + DHB derivative <br /> | |||
**[[1ius]], [[1iut]], [[1iuu]] – PaPHBH + FAD + 4-aminobenzoate <br /> | **[[1ius]], [[1iut]], [[1iuu]] – PaPHBH + FAD + 4-aminobenzoate <br /> | ||
**[[ | **[[6ju1]] – PaPHBH (mutant) + FAD + DHB derivative <br /> | ||
**[[1d7l]] – PaPHBH + FAD derivative + PHB <br /> | **[[1d7l]] – PaPHBH + FAD derivative + PHB <br /> | ||
**[[1k0i]], [[1ykj]] – PaPHBH (mutant) + FAD + PHB <br /> | **[[1k0i]], [[1ykj]] – PaPHBH (mutant) + FAD + PHB <br /> | ||
**[[1k0j]] – PaPHBH (mutant) + FAD + NADPH <br /> | **[[1k0j]] – PaPHBH (mutant) + FAD + NADPH <br /> | ||
**[[1k0l]] – PaPHBH (mutant) + FAD <br /> | **[[1k0l]] – PaPHBH (mutant) + FAD <br /> | ||
**[[6dll]] – PfPHBH + FAD – ''Pseudomonas putida''<br /> | **[[5tti]], [[6dll]] – PfPHBH + FAD – ''Pseudomonas putida''<br /> | ||
**[[2dki]] – CtPHBH + FAD – ''Comamonas testosteroni''<br /> | **[[2dki]] – CtPHBH + FAD – ''Comamonas testosteroni''<br /> | ||
**[[2dkh]] – CtPHBH + FAD + hydroxy-benzoate <br /> | **[[2dkh]] – CtPHBH + FAD + hydroxy-benzoate <br /> | ||
*Apartyl/asparaginyl β-hydroxylase | *Apartyl/asparaginyl β-hydroxylase; Domain – oxygenase and TPR 301-758 | ||
**[[6qa5]] – hAAH oxygenase and TPR domain | **[[6qa5]] – hAAH oxygenase and TPR domain<br /> | ||
**[[5jz6]] – hAAH oxygenase and TPR domain + malate + Mn <br /> | **[[5jz6]] – hAAH oxygenase and TPR domain + malate + Mn <br /> | ||
**[[5apa]] – hAAH residues 562-758 + malate + Ni <br /> | **[[5apa]] – hAAH residues 562-758 + malate + Ni <br /> | ||
**[[5jza]] – hAAH oxygenase and TPR domain + oxalylglycine + Mn <br /> | **[[5jza]] – hAAH oxygenase and TPR domain + oxalylglycine + Mn <br /> | ||
**[[5jz8]], [[5jzu]], [[6rk9]], [[5jqy]] – hAAH oxygenase and TPR domain + | **[[6yyu]], [[6yyv]] – hAAH oxygenase and TPR domain + oxoglutarate + Mn <br /> | ||
**[[6yyw]], [[6yyx]], [[6yyy]], [[6z6q]] – hAAH oxygenase and TPR domain + oxoglutarate + Mn + coagulation factor X peptide<br /> | |||
**[[5jz8]], [[5jzu]], [[6rk9]], [[5jqy]], [[6rk9]], [[6z6r]] – hAAH oxygenase and TPR domain + oxalyl derivative + Mn + coagulation factor X peptide<br /> | |||
**[[7e6j]] – hAAH oxygenase and TPR domain (mutant) + coagulation factor X peptide<br /> | |||
**[[6q9f]], [[6q9i]] – hAAH oxygenase and TPR domain (mutant) + oxalylglycine + Mn + coagulation factor X peptide<br /> | **[[6q9f]], [[6q9i]] – hAAH oxygenase and TPR domain (mutant) + oxalylglycine + Mn + coagulation factor X peptide<br /> | ||
**[[5jtc]] – hAAH oxygenase and TPR domain + pyridine dicarboxylate + Mn + coagulation factor X peptide<br /> | **[[5jtc]], [[7bmi]], [[7bmj]] – hAAH oxygenase and TPR domain + pyridine dicarboxylate + Mn + coagulation factor X peptide<br /> | ||
*Alpha-ketoglutarate-dependent L-arginine hydroxylase | *Alpha-ketoglutarate-dependent L-arginine hydroxylase | ||