3i5f: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 3: Line 3:
<StructureSection load='3i5f' size='340' side='right'caption='[[3i5f]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
<StructureSection load='3i5f' size='340' side='right'caption='[[3i5f]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3i5f]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Loligo_pealei Loligo pealei] and [http://en.wikipedia.org/wiki/Todarodes_pacificus Todarodes pacificus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2oy6 2oy6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5F OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3I5F FirstGlance]. <br>
<table><tr><td colspan='2'>[[3i5f]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Doryteuthis_pealeii Doryteuthis pealeii] and [https://en.wikipedia.org/wiki/Todarodes_pacificus Todarodes pacificus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2oy6 2oy6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I5F FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2oy6|2oy6]], [[3i5g|3i5g]], [[3i5h|3i5h]], [[3i5i|3i5i]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3i5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5f OCA], [http://pdbe.org/3i5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3i5f RCSB], [http://www.ebi.ac.uk/pdbsum/3i5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5f ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5f OCA], [https://pdbe.org/3i5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i5f RCSB], [https://www.ebi.ac.uk/pdbsum/3i5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5f ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/MLE_TODPA MLE_TODPA]] In molluscan muscle, calcium regulation is associated with myosin rather than with actin. Muscle myosin contains two types of light chains: the catalytic light chain, essential for ATPase activity, and the regulatory light chain, a calcium-binding protein responsible for Ca(2+) dependent binding and Ca(2+) dependent Mg-ATPase activity. [[http://www.uniprot.org/uniprot/MLR_TODPA MLR_TODPA]] In molluscan muscle, calcium regulation is associated with myosin rather than with actin. Muscle myosin contains two types of light chains: the catalytic light chain, essential for ATPase activity, and the regulatory light chain, a calcium-binding protein responsible for Ca(2+) dependent binding and Ca(2+) dependent Mg-ATPase activity.
[https://www.uniprot.org/uniprot/O44934_DORPE O44934_DORPE]  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 37:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Doryteuthis pealeii]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Loligo pealei]]
[[Category: Todarodes pacificus]]
[[Category: Todarodes pacificus]]
[[Category: Brown, J H]]
[[Category: Brown JH]]
[[Category: Cohen, C]]
[[Category: Cohen C]]
[[Category: Gourinath, S]]
[[Category: Gourinath S]]
[[Category: Himmel, D M]]
[[Category: Himmel DM]]
[[Category: Kovacs, M]]
[[Category: Kovacs M]]
[[Category: Neall-Hennessey, E O]]
[[Category: Nyitray L]]
[[Category: Nyitray, L]]
[[Category: O'Neall-Hennessey E]]
[[Category: Reshetnikova, L]]
[[Category: Reshetnikova L]]
[[Category: Reutzel, R]]
[[Category: Reutzel R]]
[[Category: Szent-Gyorgyi, A G]]
[[Category: Szent-Gyorgyi AG]]
[[Category: Yang, Y]]
[[Category: Yang Y]]
[[Category: Actin-binding]]
[[Category: Atp-binding]]
[[Category: Calcium]]
[[Category: Coiled coil]]
[[Category: Contractile protein]]
[[Category: Mg adp]]
[[Category: Motor protein]]
[[Category: Muscle protein]]
[[Category: Myosin]]
[[Category: Myosin ii s1]]
[[Category: Nucleotide-binding]]
[[Category: Post-rigor state]]
[[Category: Squid]]
[[Category: Thick filament]]