5tpr: Difference between revisions

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<StructureSection load='5tpr' size='340' side='right'caption='[[5tpr]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='5tpr' size='340' side='right'caption='[[5tpr]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5tpr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_atcc29413 Anabaena atcc29413]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TPR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5TPR FirstGlance]. <br>
<table><tr><td colspan='2'>[[5tpr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichormus_variabilis_ATCC_29413 Trichormus variabilis ATCC 29413]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TPR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TPR FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Ava_3858 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=240292 Anabaena ATCC29413])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_synthase 3-dehydroquinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.4 4.2.3.4] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5tpr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tpr OCA], [https://pdbe.org/5tpr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5tpr RCSB], [https://www.ebi.ac.uk/pdbsum/5tpr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5tpr ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5tpr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tpr OCA], [http://pdbe.org/5tpr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tpr RCSB], [http://www.ebi.ac.uk/pdbsum/5tpr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tpr ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DDGS_TRIV2 DDGS_TRIV2] Catalyzes the conversion of sedoheptulose 7-phosphate to demethyl-4-deoxygadusol (DDG) (PubMed:22741921). Involved in the synthesis of the mycosporine-like amino acid shinorine, a natural sunscreen compound that protects the cell against UV radiation (By similarity).[UniProtKB:B2J6X9]<ref>PMID:22741921</ref>
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<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: 3-dehydroquinate synthase]]
[[Category: Anabaena atcc29413]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Karplus, P A]]
[[Category: Trichormus variabilis ATCC 29413]]
[[Category: Kean, K M]]
[[Category: Karplus PA]]
[[Category: Lyase]]
[[Category: Kean KM]]
[[Category: Natural product]]
[[Category: Rossmann fold]]
[[Category: Secondary metabolism]]
[[Category: Sedoheptulose 7-phosphate cyclase]]
[[Category: Sugar phosphate cyclase]]
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