5vm8: Difference between revisions

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<StructureSection load='5vm8' size='340' side='right'caption='[[5vm8]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='5vm8' size='340' side='right'caption='[[5vm8]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5vm8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"diplococcus_gonorrhoeae"_(zopf_1885)_lehmann_and_neumann_1896 "diplococcus gonorrhoeae" (zopf 1885) lehmann and neumann 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VM8 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5VM8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5vm8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_gonorrhoeae Neisseria gonorrhoeae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VM8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VM8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rsmE, WHOW_01089 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=485 "Diplococcus gonorrhoeae" (Zopf 1885) Lehmann and Neumann 1896])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/16S_rRNA_(uracil(1498)-N(3))-methyltransferase 16S rRNA (uracil(1498)-N(3))-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.193 2.1.1.193] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vm8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vm8 OCA], [https://pdbe.org/5vm8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vm8 RCSB], [https://www.ebi.ac.uk/pdbsum/5vm8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vm8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5vm8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vm8 OCA], [http://pdbe.org/5vm8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vm8 RCSB], [http://www.ebi.ac.uk/pdbsum/5vm8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vm8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/A0A1D3F5D3_NEIGO A0A1D3F5D3_NEIGO]] Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.[PIRNR:PIRNR015601]  
[https://www.uniprot.org/uniprot/Q5F4Y3_NEIG1 Q5F4Y3_NEIG1] Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.[ARBA:ARBA00025699][PIRNR:PIRNR015601]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Neisseria gonorrhoeae]]
[[Category: Domain protein]]
[[Category: Niaid]]
[[Category: Protein knot]]
[[Category: Rna methyltransferase]]
[[Category: Sah]]
[[Category: Sam]]
[[Category: Ssgcid]]
[[Category: Transferase]]
[[Category: Trefoil knot]]
Retrieved from "https://proteopedia.org/5vm8"