5x5i: Difference between revisions

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<StructureSection load='5x5i' size='340' side='right'caption='[[5x5i]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
<StructureSection load='5x5i' size='340' side='right'caption='[[5x5i]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5x5i]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X5I OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5X5I FirstGlance]. <br>
<table><tr><td colspan='2'>[[5x5i]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X5I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X5I FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.554&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5x5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x5i OCA], [http://pdbe.org/5x5i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5x5i RCSB], [http://www.ebi.ac.uk/pdbsum/5x5i PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5x5i ProSAT]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x5i OCA], [https://pdbe.org/5x5i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x5i RCSB], [https://www.ebi.ac.uk/pdbsum/5x5i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x5i ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/RCDA_ECOLI RCDA_ECOLI]] Regulates the expression of a number of genes involved in biofilm formation and stress response. Target genes include six stress-response transcriptional regulators: csgD, which is a master regulator of biofilm formation, appY, sxy, ycgF, fimB and rcdA itself. This indicates that a large number of genes must be regulated indirectly via these transcriptional regulators. Acts by binding to the upstream region of its target genes.<ref>PMID:23233451</ref>
[https://www.uniprot.org/uniprot/RCDA_ECOLI RCDA_ECOLI] Regulates the expression of a number of genes involved in biofilm formation and stress response. Target genes include six stress-response transcriptional regulators: csgD, which is a master regulator of biofilm formation, appY, sxy, ycgF, fimB and rcdA itself. This indicates that a large number of genes must be regulated indirectly via these transcriptional regulators. Acts by binding to the upstream region of its target genes.<ref>PMID:23233451</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
*[[RcdA|RcdA]]
*[[RcdA|RcdA]]
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Escherichia coli K-12]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Hirata, A]]
[[Category: Hirata A]]
[[Category: Ishihama, A]]
[[Category: Ishihama A]]
[[Category: Nakano, M]]
[[Category: Nakano M]]
[[Category: Ogasawara, H]]
[[Category: Ogasawara H]]
[[Category: Shimada, T]]
[[Category: Shimada T]]
[[Category: Sugino, H]]
[[Category: Sugino H]]
[[Category: Usui, M]]
[[Category: Usui M]]
[[Category: Biofilm formation]]
[[Category: Dimer]]
[[Category: Master transcription regulator]]
[[Category: Tetr family transcription regulator]]
[[Category: Transcription]]