7cpm: Difference between revisions

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<StructureSection load='7cpm' size='340' side='right'caption='[[7cpm]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='7cpm' size='340' side='right'caption='[[7cpm]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[7cpm]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thefy Thefy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CPM OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7CPM FirstGlance]. <br>
<table><tr><td colspan='2'>[[7cpm]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermobifida_fusca_YX Thermobifida fusca YX]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CPM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CPM FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tfu_0853 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269800 THEFY])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.88 2.5.1.88] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cpm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cpm OCA], [https://pdbe.org/7cpm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cpm RCSB], [https://www.ebi.ac.uk/pdbsum/7cpm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cpm ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7cpm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cpm OCA], [http://pdbe.org/7cpm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7cpm RCSB], [http://www.ebi.ac.uk/pdbsum/7cpm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7cpm ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/DPDP_THEFY DPDP_THEFY]] Catalyzes the synthesis of Z,E-mixed prenyl diphosphates by a condensation of isopentenyl diphosphate to an allylic diphosphate. It shows a large substrate specificity accepting dimethylallyl diphosphate (DMAPP), GPP, E,Efarnesyl diphosphate (FPP), E,E,E-geranylgeranyl diphosphate (GGPP), neryl diphosphate (Z-GPP), and (2Z,6E)-farnesyl diphosphate (Z,E-FPP) as allylic substrates. The enzyme exhibits the highest activity when Z,E-FPP is employed as an allylic substrate. The major product is dodecaprenyl diphosphate (C60) under every allylic substrate conditions, but the enzyme is also able to synthesize even C70 prenyl diphosphate as the maximum chain-length product.<ref>PMID:19447338</ref>
[https://www.uniprot.org/uniprot/DPDP_THEFY DPDP_THEFY] Catalyzes the synthesis of Z,E-mixed prenyl diphosphates by a condensation of isopentenyl diphosphate to an allylic diphosphate. It shows a large substrate specificity accepting dimethylallyl diphosphate (DMAPP), GPP, E,Efarnesyl diphosphate (FPP), E,E,E-geranylgeranyl diphosphate (GGPP), neryl diphosphate (Z-GPP), and (2Z,6E)-farnesyl diphosphate (Z,E-FPP) as allylic substrates. The enzyme exhibits the highest activity when Z,E-FPP is employed as an allylic substrate. The major product is dodecaprenyl diphosphate (C60) under every allylic substrate conditions, but the enzyme is also able to synthesize even C70 prenyl diphosphate as the maximum chain-length product.<ref>PMID:19447338</ref>  
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== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Thefy]]
[[Category: Thermobifida fusca YX]]
[[Category: Transferase]]
[[Category: Ambo T]]
[[Category: Ambo, T]]
[[Category: Koyama T]]
[[Category: Koyama, T]]
[[Category: Kurokawa H]]
[[Category: Kurokawa, H]]
[[Category: Takahashi S]]
[[Category: Takahashi, S]]
[[Category: Prenyltransferase]]