Cavity programs: Difference between revisions
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==Jmol== | ==Jmol== | ||
<table align="right" width="350" cellpadding="5" style="border: 1px solid black; border-collapse:collapse;"><tr><td> | |||
Interior (buried) cavities in the [[SARS-CoV-2 spike protein]] rendered as isosurfaces by Jmol using a cavity probe radius of 2.6 Å and a surface smoothing probe radius of 10 Å. | |||
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[[Image:Jmol-cavities-6zgi.png|180px]] | |||
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[[Jmol]] can identify and display pockets and cavities as isosurfaces. Examples are shown at [[Jmol/Cavities pockets and tunnels]], where you will also find explanations of the interior cavity and pocket commands. | [[Jmol]] can identify and display pockets and cavities as isosurfaces. Examples are shown at [[Jmol/Cavities pockets and tunnels]], where you will also find explanations of the interior cavity and pocket commands. | ||
==References== | ==References== | ||
<references /> | <references /> | ||