Cavity programs: Difference between revisions
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==AVP== | ==AVP== | ||
[http://www.bioinf.org.uk/software/avp/ AVP (Another Void Program): "Voids are defined as | [http://www.bioinf.org.uk/software/avp/ AVP (Another Void Program)]: "Voids are defined as | ||
holes in the protein that are not accessible to solvent, but into | holes in the protein that are not accessible to solvent, but into | ||
which a molecule of a given radius (such as a water) can fit. ... Initially a course grid is used (default 1A), but close to the protein a finer grid (default 0.1A) is | which a molecule of a given radius (such as a water) can fit. ... Initially a course grid is used (default 1A), but close to the protein a finer grid (default 0.1A) is | ||
