Cavity programs: Difference between revisions
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===I. Cavities=== | ===I. Cavities=== | ||
These programs identify any cavities between atoms of the macromolecule, or pockets beneath a smoothed macromolecular surface, that are larger than the probe diameter. '''No starting position need be specified'''. | These programs identify any cavities between atoms of the macromolecule, or pockets beneath a smoothed macromolecular surface, that are larger than the probe diameter. '''No starting position need be specified'''. | ||
*[[AVP]] | *[[#AVP|AVP]] | ||
*[[#CASTp|CASTp]] | *[[#CASTp|CASTp]] | ||
*[[#Jmol|Jmol]] Cavities as isosurfaces. | *[[#Jmol|Jmol]] Cavities as isosurfaces. | ||
