1qmd: Difference between revisions

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<StructureSection load='1qmd' size='340' side='right'caption='[[1qmd]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='1qmd' size='340' side='right'caption='[[1qmd]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1qmd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_perfringens"_veillon_and_zuber_1898 "bacillus perfringens" veillon and zuber 1898]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QMD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QMD FirstGlance]. <br>
<table><tr><td colspan='2'>[[1qmd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QMD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QMD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ah7|1ah7]], [[1ca1|1ca1]], [[1qm6|1qm6]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phospholipase_C Phospholipase C], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.4.3 3.1.4.3] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qmd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qmd OCA], [https://pdbe.org/1qmd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qmd RCSB], [https://www.ebi.ac.uk/pdbsum/1qmd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qmd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qmd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qmd OCA], [https://pdbe.org/1qmd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qmd RCSB], [https://www.ebi.ac.uk/pdbsum/1qmd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qmd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PHLC_CLOP1 PHLC_CLOP1] Bacterial hemolysins are exotoxins that attack blood cell membranes and cause cell rupture. Constitutes an essential virulence factor in gas gangrene. Binds to eukaryotic membranes where it hydrolyzes both phosphatidylcholine and sphingomyelin. The diacylglycerol produced can activate both the arachidonic acid pathway, leading to modulation of the inflammatory response cascade and thrombosis, and protein kinase C, leading to activation of eukaryotic phospholipases and further membrane damage. Acts on human and mouse erythrocytes, but not on rabbit or horse erythrocytes.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus perfringens veillon and zuber 1898]]
[[Category: Clostridium perfringens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Phospholipase C]]
[[Category: Basak AK]]
[[Category: Basak, A K]]
[[Category: Miller J]]
[[Category: Miller, J]]
[[Category: Naylor CE]]
[[Category: Naylor, C E]]
[[Category: Titball RW]]
[[Category: Titball, R W]]
[[Category: C2 domain]]
[[Category: Ca and membrane binding]]
[[Category: Gangrene determinant]]
[[Category: Hydrolase]]
[[Category: Zinc phospholipase c]]
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