AlphaFold2 examples from CASP 14: Difference between revisions
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===Third Best Prediction for ORF8=== | ===Third Best Prediction for ORF8=== | ||
The third best prediction was by the Perez Lab, with GDT_TS 33 (see TABLE above). It correctly predicted the anti-parallel beta sheet formed by the amino and carboxy terminal ends of the chain. <scene name='87/875686/3rd_best_orf8/1'>When the 2-stranded anti-parallel beta | The third best prediction was by the Perez Lab, with GDT_TS 33 (see TABLE above). It correctly predicted the anti-parallel beta sheet formed by the amino and carboxy terminal ends of the chain. <scene name='87/875686/3rd_best_orf8/1'>When the 2-stranded anti-parallel beta sheets formed by the ends of the chains are aligned, the remainder aligns poorly</scene>. This prediction '''failed to include any of the three disulfide bonds''' found in the [[empirical models]], or in the best and 2nd best predictions (not shown). | ||
===Baker Rosetta Server Prediction for ORF8=== | ===Baker Rosetta Server Prediction for ORF8=== | ||
