Calculating GDT TS: Difference between revisions
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:Caveat: If the first structure is half the length of the second '''reference''' structure, then the maximum possible LGA score is 50%. On the other hand, if the second structure is half the length of the first one, then the maximum possible LGA score is 100%. In our example, the length of 5a2f_A is 218 amino acids, and the length of the reference structure 7jx6_A is 104. Therefore, a score of 100 is not impossible. | :Caveat: If the first structure is half the length of the second '''reference''' structure, then the maximum possible LGA score is 50%. On the other hand, if the second structure is half the length of the first one, then the maximum possible LGA score is 100%. In our example, the length of 5a2f_A is 218 amino acids, and the length of the reference structure 7jx6_A is 104. Therefore, a score of 100 is not impossible. | ||
===Run 2: GDT_TS=== | |||
Run 2 uses the superposition determined in Run 1. | |||
==References== | ==References== | ||
<references /> | <references /> | ||
