|
|
| Line 4: |
Line 4: |
| {{#tree:id=OrganizedByTopic|openlevels=0| | | {{#tree:id=OrganizedByTopic|openlevels=0| |
|
| |
|
| *CheY | | *CheY or response regulator receiver protein |
|
| |
|
| **[[6tg7]] - EcCheY – ''Escherichia coli''<br /> | | **[[6tg7]] - EcCheY – ''Escherichia coli''<br /> |
| Line 18: |
Line 18: |
| **[[2chy]] – StCheY - ''Salmonella typhimurium'' <br /> | | **[[2chy]] – StCheY - ''Salmonella typhimurium'' <br /> |
| **[[5hm6]] – CheY – ''Acinetobacter baumannii'' <br /> | | **[[5hm6]] – CheY – ''Acinetobacter baumannii'' <br /> |
| | **[[7x1k]] – CheY – ''Listeria monocytogenes'' <br /> |
|
| |
|
| *''CheY complexes'' | | *''CheY complexes'' |
| Line 40: |
Line 41: |
| **[[4hns]] - VcCheY + BeF3 + Mg<br /> | | **[[4hns]] - VcCheY + BeF3 + Mg<br /> |
| **[[4lx8]] - VcCheY + Mg<br /> | | **[[4lx8]] - VcCheY + Mg<br /> |
| **[[6ekg]], [[6ekh]] – CheY + Mg – ''Methaococcus maripaludis''<br /> | | **[[6ekg]], [[6ekh]] – MmCheY + Mg – ''Methaococcus maripaludis''<br /> |
| | **[[7od9]] – MmCheY + CheF C-terminal<br /> |
|
| |
|
| *Chey-like | | *Chey-like |
| Line 129: |
Line 131: |
| **[[6mni]] - Mche cache domain 28-293 – ''Pseudomonas syringae''<br /> | | **[[6mni]] - Mche cache domain 28-293 – ''Pseudomonas syringae''<br /> |
| **[[6pzj]] - Mche N-terminal domain 43-304 – ''Leptospira interrogans''<br /> | | **[[6pzj]] - Mche N-terminal domain 43-304 – ''Leptospira interrogans''<br /> |
| | | **[[7w0w]] - Mche – ''Bacillus velezensis'' <br /> |
|
| |
|
| *Methyl-accepting chemotaxis protein complex | | *Methyl-accepting chemotaxis protein complex |
| Line 144: |
Line 146: |
| **[[6w3t]], [[6w3x]] - CjMche LBD + Val derivative <br /> | | **[[6w3t]], [[6w3x]] - CjMche LBD + Val derivative <br /> |
| **[[6w3v]], [[6w3y]] - CjMche LBD + amino acid <br /> | | **[[6w3v]], [[6w3y]] - CjMche LBD + amino acid <br /> |
| | **[[7psg]] - Mche LBD + betaine – ''Pectobacterium atrosepticum''<br /> |
|
| |
|
| *''Heme-containing methyl-accepting chemotaxis protein'' | | *''Heme-containing methyl-accepting chemotaxis protein'' |
3D structures of chemotaxis protein
Updated on 21-November-2022
{"openlevels":0}
- CheY or response regulator receiver protein
- 6tg7 - EcCheY – Escherichia coli
- 1ab6, 1d4z, 1e6m, 1e6k, 1e6l, 1jbe, 1mih, 3oo0, 3oo1, 6chy, 5chy – EcCheY (mutant)
- 2id7, 2id9, 2idm – EcCheY-phosphono (mutant)
- 1djm – EcCheY – NMR
- 1tmy, 2tmy, 3tmy, 4tmy - TmCheY – Thermotoga maritima
- 4qyw, 6c40 - TmCheY (mutant)
- 4h60, 4hnr, 4jp1 – VcCheY – Vibrio cholerae
- 4hnq - VcCheY (mutant)
- 3gwg – HpCheY - Helicobacter pylori
- 3h1f, 3h1g - HpCheY (mutant)
- 2chy – StCheY - Salmonella typhimurium
- 5hm6 – CheY – Acinetobacter baumannii
- 7x1k – CheY – Listeria monocytogenes
- CheY complexes
- 1zdm – EcCheY + Xe
- 3f7n, 3fft, 3ffw, 3ffx, 3fgz, 3myy, 3olv, 3olw, 3olx, 3oly - EcCheY (mutant) + BeF3 + Mn
- 1fqw - EcCheY + BeF3 + Mn
- 3rvj, 3rvk, 3rvl, 3rvm, 3rvn, 3rvo, 3rvp, 3rvq, 3rvr, 3rvs - EcCheY (mutant) + BeF3 + Mn
- 5d2c, 5dgc, 5dkf - EcCheY (mutant) + BeF3 + Mn + imidazole
- 1bdj – EcCheY + aerobic respiration control protein HPT domain
- 1u8t – EcCheY + flagellar motor switch protein FLIM
- 2b1j, 1f4v - EcCheY + flagellar motor switch protein FLIM N terminal
- 1ffg, 1ffs – EcCheY + CheA CheY-binding domain
- 1ffw – EcCheY + CheA CheY-binding domain + imido phosphate
- 1kmi - EcCheY + CheZ
- 2lp4 - EcCheY + CheA
- 2fka, 2flk, 2flw, 2fmf, 2fmh, 2fmi, 2fmk, 2pl9, 2pmc – StCheY + CheZ peptide
- 2che, 2chf – StCheY + Mg
- 4iga - TmCheY + flagellar motor switch protein FLIM peptide
- 1u0s - TmCheY response regulating domain + CheA P2 domain
- 3h1e - HpCheY + BeF3 + Mn
- 4hns - VcCheY + BeF3 + Mg
- 4lx8 - VcCheY + Mg
- 6ekg, 6ekh – MmCheY + Mg – Methaococcus maripaludis
- 7od9 – MmCheY + CheF C-terminal
- Chey-like
- 3snk - CheyL - Mesorhizobium loti
- 3cg4, 3crn - CheyL reciever domain - Methanospirillum hungatei
- 3i42 - CheyL receiver domain - Methylobacter flagellates
- 3bre - CheyL - Pseudomonas aeruginosa
- CheX
- 1xko– TmCheX
- 3hm4 – CheX – Desulfovibrio desulfuricans
- 3hzh – CheX + Che-3 – Borrelia burgdorferi
- 6vpw – CheX – Vibrio vulnificus
- CheC
- 1xkr – TmCheC
- 2f9z – TmCheC + CheD
- 3qta – CheC – Haloarcula marismortui
- CheR or chemotaxis protein methyltransferase
- 1bc5 – StCheR + chemotaxis receptor peptide
- 1af7 – StCheR
- 5ftw – CheR + SAH – Bacillus subtilis
- 5y4s - PaMche – Pseudomonas aeruginosa
- 5y4r, 5xly - PaMche + MapZ
- 5xlx - PaMche C-terminal + SAH
- CheA
- 1fwp – EcCheA – NMR
- 6s1k – EcCheA + CheW + methyl-accepting Che 1 – Cryo EM
- 3ja6 – EcCheA + CheW + methyl-accepting Che 2 – Cryo EM
- 1b3q – TmCheA dimerization, kinase and regulatory domains
- 1i58, 1i59, 1i5a, 1i5b, 1i5d - TmCheA P4 domain + ATP analog
- 6mi6 - TmCheA P4 domain + ADP analog<br /
- 1i5c - TmCheA P4 domain (mutant) + ADP
- 1tqg – TmCheA phosphotransferase domain
- 2ld6 – TmCheA HPT domain - NMR
- 2ch4 - TmCheA kinase and regulatory domains + CheW
- 4xiv - TmCheA kinase and dimerization domains
- 3ur1, 4jpb – TmCheA + CheW + methyl-accepting Che
- 1i5n – StCheA P1 domain
- 6y1y – CheA – Treponema denticola
- CheB
- 1a2o, 1chd– StCheB
- 3sft – TmCheB catalytic domain
- 3t8y – TmCheB response regulator domain
- CheW
- Aspartate chemotaxis receptor
- Methyl-accepting chemotaxis protein
- 2m7u, 2m7v, 3vv4, 6upp – TeMche GAF domain 435-584 – Thermosynechococcus elongatus
- 4fof, 4glq, 6p58, 6pru, 6pry – TeMche GAF domain (mutant)
- 3w2z – Mche residues 221-397 – Nostoc
- 3g67 – TmMche
- 3g6b – TmMche (mutant)
- 2ch7 – TmMche cytoplasmic domain
- 1qu7 – EcMcheI cytoplasmic domain
- 2ld6 – EcMche peptide - NMR
- 4z9j - EcMcheII LBD
- 2d4u – EcMcheI LBD (mutant)
- 3zx6 – EcMcheI/HAMP
- 1jmw - StMche LBD (mutant)
- 2qhk, 4exo – Mche N-terminal – Vibrio parahaemolyticus
- 3c8c – Mche N-terminal
- 3b47 – Mche periplasmic domain – Geobacter sulfurreducens
- 6iop - VcMche LBD
- 6ceq - VcMche PAS 2 domain
- 6dtm, 6e09, 6e0a – HpMche Tlpa LBD
- 6mni - Mche cache domain 28-293 – Pseudomonas syringae
- 6pzj - Mche N-terminal domain 43-304 – Leptospira interrogans
- 7w0w - Mche – Bacillus velezensis
- Methyl-accepting chemotaxis protein complex
- 3atp - EcMcheI LBD + serine
- 4z9h, 4z9i - EcMcheII LBD + aspartic acid
- 5ave, 6ioq, 6ior, 6ios, 6iot, 6iou, 6iov - VcMche LBD + amino acid
- 5avf - VcMche LBD + taurine
- 5t7m, 5t65, 5ltx, 5lto, 5lt9 - PaMche LBD + amino acid – Pseudomonas aeruginosa
- 5ltv - PaMche LBD + GABA
- 6f9g - Mche LBD + putrescine – Pseudomonas putida
- 5zoh - Mche + biliverdin - Nostoc
- 6w3o, 6w3r, 6w3p, 6w3s - CjMche LBD + Leu derivative – Campylobacter jejuni
- 6w3t, 6w3x - CjMche LBD + Val derivative
- 6w3v, 6w3y - CjMche LBD + amino acid
- 7psg - Mche LBD + betaine – Pectobacterium atrosepticum
- Heme-containing methyl-accepting chemotaxis protein
- 3eee, 3iqb, 3lah, 3lai, 3sj5, 4fdk – TtMche H-Nox domain (mutant)
- 1xbn – TtMche – Thermoanaerobacter tengcongensis
- 1u4h, 1u55, 1u56, 3tf0, 3tf1 - TtMche H-Nox domain
- 3m0b - TtMche H-Nox domain Ru-porphyrin
- 3nvr, 3nvu – TtMche N terminal (mutant)
- 4it2 - CsMche H-Nox domain Mn-porphyrin – Caldanaerobacter subterraneus
- 5jru - CsMche H-Nox domain Fe-porphyrin
- 6cww - CsMche H-Nox domain Fe-porphyrin (mutant)
- 5jrv - CsMche H-Nox domain Fe-porphyrin + NO
- 5jrx - CsMche H-Nox domain Fe-porphyrin (mutant) + CO
- Flagellar motor protein FLIN
- Chemotaxis protein MotB or motility protein B
- 3cyp, 3imp, 3s02, 3s03, 3s06, 3s0h, 3s0w, 3s0y – HpMotB C terminal
- 3cyq – HpMotB C terminal + N-acetylmuramic acid
- 5y3z, 5y40 – StMotB periplasmic domain (mutant)
- 2zov, 2zvy, 2zvz - StMotB C terminal
- Chemotaxis protein CKI
- 3mm4 – AtCKI receiver domain – Arabidopsis thaliana
- 3mmn – AtCKI receiver domain + Mg
