2p3z: Difference between revisions
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==Crystal structure of L-Rhamnonate dehydratase from Salmonella typhimurium== | ==Crystal structure of L-Rhamnonate dehydratase from Salmonella typhimurium== | ||
<StructureSection load='2p3z' size='340' side='right'caption='[[2p3z]]' scene=''> | <StructureSection load='2p3z' size='340' side='right'caption='[[2p3z]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P3Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P3Z FirstGlance]. <br> | <table><tr><td colspan='2'>[[2p3z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P3Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P3Z FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p3z OCA], [https://pdbe.org/2p3z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p3z RCSB], [https://www.ebi.ac.uk/pdbsum/2p3z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p3z ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2p3z TOPSAN]</span></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p3z OCA], [https://pdbe.org/2p3z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p3z RCSB], [https://www.ebi.ac.uk/pdbsum/2p3z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p3z ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2p3z TOPSAN]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/RHMD_SALTY RHMD_SALTY] Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy-L-rhamnonate (KDR). Can also dehydrate L-lyxonate and L-mannonate, although less efficiently, but not 2-keto-4-hydroxyheptane-1,7-dioate.<ref>PMID:18754693</ref> | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p3z ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p3z ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]] | |||
[[Category: Adams JM]] | [[Category: Adams JM]] | ||
[[Category: Almo SC]] | [[Category: Almo SC]] | ||
Latest revision as of 10:53, 30 August 2023
Crystal structure of L-Rhamnonate dehydratase from Salmonella typhimurium
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