2vry: Difference between revisions

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<StructureSection load='2vry' size='340' side='right'caption='[[2vry]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
<StructureSection load='2vry' size='340' side='right'caption='[[2vry]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2vry]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VRY FirstGlance]. <br>
<table><tr><td colspan='2'>[[2vry]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VRY FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.87&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1q1f|1q1f]], [[1w92|1w92]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vry FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vry OCA], [https://pdbe.org/2vry PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vry RCSB], [https://www.ebi.ac.uk/pdbsum/2vry PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vry ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vry FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vry OCA], [https://pdbe.org/2vry PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vry RCSB], [https://www.ebi.ac.uk/pdbsum/2vry PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vry ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NGB_MOUSE NGB_MOUSE] Involved in oxygen transport in the brain. Hexacoordinate globin, displaying competitive binding of oxygen or the distal His residue to the iron atom. Not capable of penetrating cell membranes. The deoxygenated form exhibits nitrite reductase activity inhibiting cellular respiration via NO-binding to cytochrome c oxidase. Involved in neuroprotection during oxidative stress. May exert its anti-apoptotic activity by acting to reset the trigger level of mitochondrial cytochrome c release necessary to commit the cells to apoptosis.<ref>PMID:11473111</ref> <ref>PMID:11473128</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Lk3 transgenic mice]]
[[Category: Mus musculus]]
[[Category: Angelo, P D]]
[[Category: Arcovito A]]
[[Category: Arcovito, A]]
[[Category: Brunori M]]
[[Category: Brunori, M]]
[[Category: D'Angelo P]]
[[Category: Longa, S Della]]
[[Category: Della Longa S]]
[[Category: Mancini, G]]
[[Category: Mancini G]]
[[Category: Moschetti, T]]
[[Category: Moschetti T]]
[[Category: Vallone, B]]
[[Category: Vallone B]]
[[Category: Ferrous]]
[[Category: Globin fold]]
[[Category: Heme]]
[[Category: Heme protein]]
[[Category: Iron]]
[[Category: Metal- binding]]
[[Category: Metal-binding]]
[[Category: Neuroglobin]]
[[Category: Oxygen storage-transport complex]]
[[Category: Oxygen transport]]
[[Category: Photoreduction]]
[[Category: Transport]]

Revision as of 15:30, 13 December 2023

Mouse Neuroglobin with heme iron in the reduced ferrous state

2vry, resolution 1.87Å

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