1h4y: Difference between revisions

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<StructureSection load='1h4y' size='340' side='right'caption='[[1h4y]], [[Resolution|resolution]] 1.61&Aring;' scene=''>
<StructureSection load='1h4y' size='340' side='right'caption='[[1h4y]], [[Resolution|resolution]] 1.61&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1h4y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_14577 Atcc 14577]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H4Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H4Y FirstGlance]. <br>
<table><tr><td colspan='2'>[[1h4y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lysinibacillus_sphaericus Lysinibacillus sphaericus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H4Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H4Y FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1h4x|1h4x]], [[1h4z|1h4z]]</div></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.61&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h4y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h4y OCA], [https://pdbe.org/1h4y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h4y RCSB], [https://www.ebi.ac.uk/pdbsum/1h4y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h4y ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h4y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h4y OCA], [https://pdbe.org/1h4y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h4y RCSB], [https://www.ebi.ac.uk/pdbsum/1h4y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h4y ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SP2AA_LYSSH SP2AA_LYSSH] In the phosphorylated form it could act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma f from inhibition.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h4y ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h4y ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
BACKGROUND: The asymmetric cell division during sporulation in Bacillus subtilis gives rise to two compartments: the mother cell and the forespore. Each follow different programs of gene expression coordinated by a succession of alternate RNA polymerase sigma factors. The activity of the first of these sigma factors, sigmaF, is restricted to the forespore although sigmaF is present in the predivisional cell and partitions into both compartments following the asymmetric septation. For sigmaF to become active, it must escape from a complex with its cognate anti-sigma factor, SpoIIAB. This relief from SpoIIAB inhibition requires the dephosphorylation of the anti-sigma factor antagonist, SpoIIAA. The phosphorylation state of SpoIIAA is thus a key determinant of sigmaF activity and cell fate. RESULTS: We have solved the crystal structures of SpoIIAA from Bacillus sphaericus in its phosphorylated and unphosphorylated forms. The overall structure consists of a central beta-pleated sheet, one face of which is buried by a pair of alpha helices, while the other is largely exposed to solvent. The site of phosphorylation, Ser57, is located at the N terminus of helix alpha2. The phosphoserine is exceptionally well defined in the 1.2 A electron density maps, revealing that the structural changes accompanying phosphorylation are slight. CONCLUSIONS: Comparison of unphosphorylated and phosphorylated SpoIIAA shows that covalent modification has no significant effect on the global structure of the protein. The phosphoryl group has a passive role as a negatively charged flag rather than the active role it plays as a nucleus of structural reorganization in many eukaryotic signaling systems.
Structure of the Bacillus cell fate determinant SpoIIAA in phosphorylated and unphosphorylated forms.,Seavers PR, Lewis RJ, Brannigan JA, Verschueren KH, Murshudov GN, Wilkinson AJ Structure. 2001 Jul 3;9(7):605-14. PMID:11470435<ref>PMID:11470435</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 1h4y" style="background-color:#fffaf0;"></div>


==See Also==
==See Also==
*[[Anti-sigma factor antagonist 3D structures|Anti-sigma factor antagonist 3D structures]]
*[[Anti-sigma factor antagonist 3D structures|Anti-sigma factor antagonist 3D structures]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 14577]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Brannigan, J A]]
[[Category: Lysinibacillus sphaericus]]
[[Category: Lewis, R J]]
[[Category: Brannigan JA]]
[[Category: Murshudov, G N]]
[[Category: Lewis RJ]]
[[Category: Seavers, P R]]
[[Category: Murshudov GN]]
[[Category: Verschueren, K H.G]]
[[Category: Seavers PR]]
[[Category: Wilkinson, A J]]
[[Category: Verschueren KHG]]
[[Category: Cell differentiation]]
[[Category: Wilkinson AJ]]
[[Category: Phosphorylation]]
[[Category: Sigma factor]]
[[Category: Sporulation]]

Revision as of 11:28, 27 March 2024

Structure of the Anti-Sigma Factor Antagonist SpoIIAA in its Unphosphorylated Form

1h4y, resolution 1.61Å

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