1ris: Difference between revisions

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<StructureSection load='1ris' size='340' side='right'caption='[[1ris]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='1ris' size='340' side='right'caption='[[1ris]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1ris]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"flavobacterium_thermophilum"_yoshida_and_oshima_1971 "flavobacterium thermophilum" yoshida and oshima 1971]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RIS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RIS FirstGlance]. <br>
<table><tr><td colspan='2'>[[1ris]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RIS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RIS FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ris FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ris OCA], [https://pdbe.org/1ris PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ris RCSB], [https://www.ebi.ac.uk/pdbsum/1ris PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ris ProSAT]</span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ris FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ris OCA], [https://pdbe.org/1ris PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ris RCSB], [https://www.ebi.ac.uk/pdbsum/1ris PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ris ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/RS6_THETH RS6_THETH]] Located on the outer edge of the platform on the body of the 30S subunit (By similarity).  
[https://www.uniprot.org/uniprot/RS6_THETH RS6_THETH] Located on the outer edge of the platform on the body of the 30S subunit (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ris ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ris ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The amino acid sequence and crystal structure of the ribosomal protein S6 from the small ribosomal subunit of Thermus thermophilus have been determined. S6 is a small protein with 101 amino acid residues. The 3D structure, which was determined to 2.0 A resolution, consists of a four-stranded anti-parallel beta-sheet with two alpha-helices packed on one side. Similar folding patterns have been observed for other ribosomal proteins and may suggest an original RNA-interacting motif. Related topologies are also found in several other nucleic acid-interacting proteins and based on the assumption that the structure of the ribosome was established early in the molecular evolution, the possibility that an ancestral RNA-interacting motif in ribosomal proteins is the evolutionary origin for the nucleic acid-interacting domain in large classes of ribonucleic acid binding proteins should be considered.
Crystal structure of the ribosomal protein S6 from Thermus thermophilus.,Lindahl M, Svensson LA, Liljas A, Sedelnikova SE, Eliseikina IA, Fomenkova NP, Nevskaya N, Nikonov SV, Garber MB, Muranova TA, et al. EMBO J. 1994 Mar 15;13(6):1249-54. PMID:8137808<ref>PMID:8137808</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 1ris" style="background-color:#fffaf0;"></div>


==See Also==
==See Also==
*[[Ribosomal protein S6|Ribosomal protein S6]]
*[[Ribosomal protein S6|Ribosomal protein S6]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Flavobacterium thermophilum yoshida and oshima 1971]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Amons, R]]
[[Category: Thermus thermophilus]]
[[Category: Eliseikina, I A]]
[[Category: Amons R]]
[[Category: Fomenkova, N P]]
[[Category: Eliseikina IA]]
[[Category: Garber, M B]]
[[Category: Fomenkova NP]]
[[Category: Liljas, A]]
[[Category: Garber MB]]
[[Category: Lindahl, M]]
[[Category: Liljas A]]
[[Category: Muranova, T A]]
[[Category: Lindahl M]]
[[Category: Nevskaya, N]]
[[Category: Muranova TA]]
[[Category: Nikonov, S V]]
[[Category: Nevskaya N]]
[[Category: Rykonova, A I]]
[[Category: Nikonov SV]]
[[Category: Sedelnikova, S E]]
[[Category: Rykonova AI]]
[[Category: Svensson, L A]]
[[Category: Sedelnikova SE]]
[[Category: Ribosomal protein]]
[[Category: Svensson LA]]
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