3igd: Difference between revisions

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<StructureSection load='3igd' size='340' side='right'caption='[[3igd]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='3igd' size='340' side='right'caption='[[3igd]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3igd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IGD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IGD FirstGlance]. <br>
<table><tr><td colspan='2'>[[3igd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IGD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IGD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SNN:L-3-AMINOSUCCINIMIDE'>SNN</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SNN:L-3-AMINOSUCCINIMIDE'>SNN</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2in0|2in0]], [[3ifj|3ifj]]</div></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MT2806, MTV002.02c, recA, Rv2737c ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3igd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3igd OCA], [https://pdbe.org/3igd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3igd RCSB], [https://www.ebi.ac.uk/pdbsum/3igd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3igd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3igd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3igd OCA], [https://pdbe.org/3igd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3igd RCSB], [https://www.ebi.ac.uk/pdbsum/3igd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3igd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/RECA_MYCTU RECA_MYCTU]] Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.[HAMAP-Rule:MF_00268]  PI-MtuI is an endonuclease.[HAMAP-Rule:MF_00268]  
[https://www.uniprot.org/uniprot/RECA_MYCTU RECA_MYCTU] Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.[HAMAP-Rule:MF_00268]  PI-MtuI is an endonuclease.[HAMAP-Rule:MF_00268]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
*[[Recombinase A|Recombinase A]]
*[[3D structures of recombinase A|3D structures of recombinase A]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Belfort, M]]
[[Category: Mycobacterium tuberculosis]]
[[Category: Roey, P Van]]
[[Category: Belfort M]]
[[Category: Atp-binding]]
[[Category: Van Roey P]]
[[Category: Autocatalytic cleavage]]
[[Category: Cytoplasm]]
[[Category: Dna damage]]
[[Category: Dna recombination]]
[[Category: Dna repair]]
[[Category: Dna-binding]]
[[Category: Endonuclease]]
[[Category: Hydrolase]]
[[Category: Intron homing]]
[[Category: Mini-mini-intein splicing domain]]
[[Category: Nuclease]]
[[Category: Nucleotide-binding]]
[[Category: Protein splicing]]
[[Category: Sos response]]
[[Category: Splicing]]
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