2k84: Difference between revisions

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==Solution Structure of the equine infectious anemia virus p9 GAG protein==
==Solution Structure of the equine infectious anemia virus p9 GAG protein==
<StructureSection load='2k84' size='340' side='right'caption='[[2k84]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2k84' size='340' side='right'caption='[[2k84]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2k84]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K84 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K84 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2k84]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Equine_infectious_anemia_virus_(ISOLATE_WYOMING) Equine infectious anemia virus (ISOLATE WYOMING)]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K84 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K84 FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k84 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k84 OCA], [https://pdbe.org/2k84 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k84 RCSB], [https://www.ebi.ac.uk/pdbsum/2k84 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k84 ProSAT]</span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k84 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k84 OCA], [https://pdbe.org/2k84 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k84 RCSB], [https://www.ebi.ac.uk/pdbsum/2k84 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k84 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/GAG_EIAVY GAG_EIAVY]] Matrix protein p15 forms the outer shell of the core of the virus, lining the inner surface of the viral membrane (By similarity).  Capsid protein p26 forms the conical core of the virus that encapsulates the genomic RNA-nucleocapsid complex (By similarity).  Nucleocapsid protein p11 encapsulates and protects viral dimeric unspliced (genomic) RNA. Binds these RNAs through its zinc fingers (By similarity).  p9 plays a role in budding of the assembled particle by interacting with PDCD6IP/AIP1 (By similarity).  
[https://www.uniprot.org/uniprot/GAG_EIAVY GAG_EIAVY] Matrix protein p15 forms the outer shell of the core of the virus, lining the inner surface of the viral membrane (By similarity).  Capsid protein p26 forms the conical core of the virus that encapsulates the genomic RNA-nucleocapsid complex (By similarity).  Nucleocapsid protein p11 encapsulates and protects viral dimeric unspliced (genomic) RNA. Binds these RNAs through its zinc fingers (By similarity).  p9 plays a role in budding of the assembled particle by interacting with PDCD6IP/AIP1 (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Bruns, K]]
[[Category: Bruns K]]
[[Category: Henklein, P]]
[[Category: Henklein P]]
[[Category: Roeder, R]]
[[Category: Roeder R]]
[[Category: Sharma, A]]
[[Category: Sharma A]]
[[Category: Sharma, U]]
[[Category: Sharma U]]
[[Category: Votteler, J]]
[[Category: Votteler J]]
[[Category: Wray, V]]
[[Category: Wray V]]
[[Category: Capsid protein]]
[[Category: Core protein]]
[[Category: Host-virus interaction]]
[[Category: Metal-binding]]
[[Category: Polypeptide]]
[[Category: Viral matrix protein]]
[[Category: Viral nucleoprotein]]
[[Category: Viral protein]]
[[Category: Virion]]
[[Category: Zinc]]
[[Category: Zinc-finger]]