3dcd: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 4: | Line 4: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3dcd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DCD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DCD FirstGlance]. <br> | <table><tr><td colspan='2'>[[3dcd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DCD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DCD FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dcd OCA], [https://pdbe.org/3dcd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dcd RCSB], [https://www.ebi.ac.uk/pdbsum/3dcd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dcd ProSAT], [https://www.topsan.org/Proteins/NESGC/3dcd TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dcd OCA], [https://pdbe.org/3dcd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dcd RCSB], [https://www.ebi.ac.uk/pdbsum/3dcd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dcd ProSAT], [https://www.topsan.org/Proteins/NESGC/3dcd TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q5FKD7_LACAC Q5FKD7_LACAC] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 12: | Line 15: | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dcd_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dcd_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| Line 21: | Line 24: | ||
[[Category: Lactobacillus acidophilus]] | [[Category: Lactobacillus acidophilus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Acton | [[Category: Acton TB]] | ||
[[Category: Baran | [[Category: Baran MC]] | ||
[[Category: Foote | [[Category: Foote EL]] | ||
[[Category: Hunt | [[Category: Hunt JF]] | ||
[[Category: Kuzin | [[Category: Kuzin AP]] | ||
[[Category: Lew | [[Category: Lew S]] | ||
[[Category: Mao | [[Category: Mao L]] | ||
[[Category: Montelione | [[Category: Montelione GT]] | ||
[[Category: Nair R]] | |||
[[Category: Nair | [[Category: Rost B]] | ||
[[Category: Rost | [[Category: Seetharaman J]] | ||
[[Category: Seetharaman | [[Category: Tong L]] | ||
[[Category: Tong | [[Category: Vorobiev SM]] | ||
[[Category: Vorobiev | [[Category: Wang H]] | ||
[[Category: Wang | [[Category: Xiao R]] | ||
[[Category: Xiao | |||
