5m11: Difference between revisions
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<StructureSection load='5m11' size='340' side='right'caption='[[5m11]], [[Resolution|resolution]] 2.90Å' scene=''> | <StructureSection load='5m11' size='340' side='right'caption='[[5m11]], [[Resolution|resolution]] 2.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5m11]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[5m11]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M11 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M11 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m11 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m11 OCA], [https://pdbe.org/5m11 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m11 RCSB], [https://www.ebi.ac.uk/pdbsum/5m11 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m11 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m11 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m11 OCA], [https://pdbe.org/5m11 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m11 RCSB], [https://www.ebi.ac.uk/pdbsum/5m11 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m11 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q9S3Q8_PORGN Q9S3Q8_PORGN] | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Bzowska | [[Category: Porphyromonas gingivalis]] | ||
[[Category: Enghild | [[Category: Bzowska M]] | ||
[[Category: Goel | [[Category: Enghild JJ]] | ||
[[Category: Gomis-Ruth | [[Category: Goel A]] | ||
[[Category: Goulas | [[Category: Gomis-Ruth FX]] | ||
[[Category: Guevara | [[Category: Goulas T]] | ||
[[Category: Guo | [[Category: Guevara T]] | ||
[[Category: Ksiazek | [[Category: Guo Y]] | ||
[[Category: Kulczyk | [[Category: Ksiazek M]] | ||
[[Category: Lasica | [[Category: Kulczyk AW]] | ||
[[Category: Madej | [[Category: Lasica AM]] | ||
[[Category: Mizgalska | [[Category: Madej M]] | ||
[[Category: Nguyen | [[Category: Mizgalska D]] | ||
[[Category: Nowak | [[Category: Nguyen K-A]] | ||
[[Category: Potempa | [[Category: Nowak M]] | ||
[[Category: Potempa | [[Category: Potempa B]] | ||
[[Category: Prabhakar | [[Category: Potempa J]] | ||
[[Category: Simonian | [[Category: Prabhakar AT]] | ||
[[Category: Sztukowska | [[Category: Simonian M]] | ||
[[Category: Thogersen | [[Category: Sztukowska M]] | ||
[[Category: Widziolek | [[Category: Thogersen IB]] | ||
[[Category: Zhou | [[Category: Widziolek M]] | ||
[[Category: Zhou X]] | |||
Latest revision as of 11:21, 3 January 2024
Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
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