3ieb: Difference between revisions

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<StructureSection load='3ieb' size='340' side='right'caption='[[3ieb]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3ieb' size='340' side='right'caption='[[3ieb]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ieb]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IEB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IEB FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ieb]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IEB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IEB FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VC_A0242 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ieb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ieb OCA], [https://pdbe.org/3ieb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ieb RCSB], [https://www.ebi.ac.uk/pdbsum/3ieb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ieb ProSAT], [https://www.topsan.org/Proteins/CSGID/3ieb TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ieb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ieb OCA], [https://pdbe.org/3ieb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ieb RCSB], [https://www.ebi.ac.uk/pdbsum/3ieb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ieb ProSAT], [https://www.topsan.org/Proteins/CSGID/3ieb TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9KMS8_VIBCH Q9KMS8_VIBCH]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ie/3ieb_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ie/3ieb_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillo virgola del koch trevisan 1884]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Anderson, W]]
[[Category: Vibrio cholerae]]
[[Category: Structural genomic]]
[[Category: Anderson W]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak A]]
[[Category: Maltseva, N]]
[[Category: Maltseva N]]
[[Category: Nocek, B]]
[[Category: Nocek B]]
[[Category: Osipiuk, J]]
[[Category: Osipiuk J]]
[[Category: Stam, J]]
[[Category: Stam J]]
[[Category: 3-keto-l-gulonate-6-phosphate decarboxylase]]
[[Category: Biosynthetic protein]]
[[Category: Csgid]]
[[Category: Niaid]]
[[Category: Ulad]]

Latest revision as of 05:54, 17 October 2024

Crystal structure of 3-keto-L-gulonate-6-phosphate decarboxylase from Vibrio cholerae O1 biovar El Tor str. N16961

3ieb, resolution 2.10Å

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