BASIL2022GV3HDT: Difference between revisions
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Some of the predicted bind pockets were areas where ATP (red arrow) and dCMP (yellow arrow) binded to with the highest affinity in PyRx. | Some of the predicted bind pockets were areas where ATP (red arrow) and dCMP (yellow arrow) binded to with the highest affinity in PyRx. | ||
[[Image:DCMP.png | 400px| left| thumb| dCMP (purple) docked with 3HDT and cofactor ATP (pink). Visualized in PyMOL | [[Image:DCMP.png | 400px| left| thumb| dCMP (purple) docked with 3HDT and cofactor ATP (pink). Visualized in PyMOL. ]] | ||
[[Image:DCMP reaction.png |275px| center|thumb | Binding affinity was increased when hydroxyl group removed from ribose ring on CMP to make dCMP]] | [[Image:DCMP reaction.png |275px| center|thumb | Binding affinity was increased when hydroxyl group removed from ribose ring on CMP to make dCMP]] | ||
