3vdr: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 4: | Line 4: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3vdr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3eew 3eew]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VDR FirstGlance]. <br> | <table><tr><td colspan='2'>[[3vdr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3eew 3eew]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VDR FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3HR:(3R)-3-HYDROXYBUTANOIC+ACID'>3HR</scene>, <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3HR:(3R)-3-HYDROXYBUTANOIC+ACID'>3HR</scene>, <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdr OCA], [https://pdbe.org/3vdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdr RCSB], [https://www.ebi.ac.uk/pdbsum/3vdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdr ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdr OCA], [https://pdbe.org/3vdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdr RCSB], [https://www.ebi.ac.uk/pdbsum/3vdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdr ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/D0VWQ0_ALCFA D0VWQ0_ALCFA] | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 22: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Alcaligenes faecalis]] | [[Category: Alcaligenes faecalis]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Amano | [[Category: Amano H]] | ||
[[Category: Hoque | [[Category: Hoque MM]] | ||
[[Category: Hossain | [[Category: Hossain MT]] | ||
[[Category: Imamura | [[Category: Imamura S]] | ||
[[Category: Juan | [[Category: Juan ECM]] | ||
[[Category: Sato | [[Category: Sato Y]] | ||
[[Category: Sekiguchi | [[Category: Sekiguchi T]] | ||
[[Category: Shimizu | [[Category: Shimizu S]] | ||
[[Category: Suzuki | [[Category: Suzuki K]] | ||
[[Category: Takenaka | [[Category: Takenaka A]] | ||
[[Category: Tsunoda | [[Category: Tsunoda M]] | ||
[[Category: Yamamoto | [[Category: Yamamoto T]] | ||