3zds: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
Line 3: Line 3:
<StructureSection load='3zds' size='340' side='right'caption='[[3zds]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='3zds' size='340' side='right'caption='[[3zds]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3zds]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Psepk Psepk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZDS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZDS FirstGlance]. <br>
<table><tr><td colspan='2'>[[3zds]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida_KT2440 Pseudomonas putida KT2440]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZDS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZDS FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=HMQ:2-[(6R)-6-(DIOXIDANYL)-6-OXIDANYL-3-OXIDANYLIDENE-CYCLOHEXA-1,4-DIEN-1-YL]ETHANOIC+ACID'>HMQ</scene>, <scene name='pdbligand=HQ9:2-(6-OXIDANYL-3-OXIDANYLIDENE-CYCLOHEXA-1,4-DIEN-1-YL)ETHANOIC+ACID'>HQ9</scene>, <scene name='pdbligand=M8O:4-MALEYLACETOACETIC+ACID'>M8O</scene>, <scene name='pdbligand=OMD:2-(3,6-DIHYDROXYPHENYL)ACETIC+ACID'>OMD</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4aq2|4aq2]], [[4aq6|4aq6]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=HMQ:2-[(6R)-6-(DIOXIDANYL)-6-OXIDANYL-3-OXIDANYLIDENE-CYCLOHEXA-1,4-DIEN-1-YL]ETHANOIC+ACID'>HMQ</scene>, <scene name='pdbligand=HQ9:2-(6-OXIDANYL-3-OXIDANYLIDENE-CYCLOHEXA-1,4-DIEN-1-YL)ETHANOIC+ACID'>HQ9</scene>, <scene name='pdbligand=M8O:4-MALEYLACETOACETIC+ACID'>M8O</scene>, <scene name='pdbligand=OMD:2-(3,6-DIHYDROXYPHENYL)ACETIC+ACID'>OMD</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Homogentisate_1,2-dioxygenase Homogentisate 1,2-dioxygenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.5 1.13.11.5] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zds FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zds OCA], [https://pdbe.org/3zds PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zds RCSB], [https://www.ebi.ac.uk/pdbsum/3zds PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zds ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zds FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zds OCA], [https://pdbe.org/3zds PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zds RCSB], [https://www.ebi.ac.uk/pdbsum/3zds PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zds ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/HGD_PSEPK HGD_PSEPK]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Homogentisate 1,2-dioxygenase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Psepk]]
[[Category: Pseudomonas putida KT2440]]
[[Category: Bommer, M]]
[[Category: Bommer M]]
[[Category: Dobbek, H]]
[[Category: Dobbek H]]
[[Category: Jeoung, J H]]
[[Category: Jeoung J-H]]
[[Category: Lin, T Y]]
[[Category: Lin T-Y]]
[[Category: Alkylperoxo species]]
[[Category: Extradiol]]
[[Category: Homogentisate-semiquinone]]
[[Category: Oxidoreductase]]
[[Category: Ring-fission product]]
Retrieved from "https://proteopedia.org/3zds"