7q4k: Difference between revisions

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'''Unreleased structure'''


The entry 7q4k is ON HOLD
==Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain==
 
<StructureSection load='7q4k' size='340' side='right'caption='[[7q4k]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
Authors: Fostier, C.R., Ousalem, F., Soufari, H., Leroy, E.C., Ngo, S., Innis, A., Hashem, Y., Boel, G.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[7q4k]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7Q4K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7Q4K FirstGlance]. <br>
Description: Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1MG:1N-METHYLGUANOSINE-5-MONOPHOSPHATE'>1MG</scene>, <scene name='pdbligand=2MA:2-METHYLADENOSINE-5-MONOPHOSPHATE'>2MA</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=3AU:3-[(3S)-3-AMINO-3-CARBOXYPROPYL]URIDINE+5-(DIHYDROGEN+PHOSPHATE)'>3AU</scene>, <scene name='pdbligand=3TD:(1S)-1,4-ANHYDRO-1-(3-METHYL-2,4-DIOXO-1,2,3,4-TETRAHYDROPYRIMIDIN-5-YL)-5-O-PHOSPHONO-D-RIBITOL'>3TD</scene>, <scene name='pdbligand=4AC:N(4)-ACETYLCYTIDINE-5-MONOPHOSPHATE'>4AC</scene>, <scene name='pdbligand=4D4:(2S,3R)-2-AZANYL-5-CARBAMIMIDAMIDO-3-OXIDANYL-PENTANOIC+ACID'>4D4</scene>, <scene name='pdbligand=4OC:4N,O2-METHYLCYTIDINE-5-MONOPHOSPHATE'>4OC</scene>, <scene name='pdbligand=4SU:4-THIOURIDINE-5-MONOPHOSPHATE'>4SU</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=5MU:5-METHYLURIDINE+5-MONOPHOSPHATE'>5MU</scene>, <scene name='pdbligand=6MZ:N6-METHYLADENOSINE-5-MONOPHOSPHATE'>6MZ</scene>, <scene name='pdbligand=D2T:(3R)-3-(METHYLSULFANYL)-L-ASPARTIC+ACID'>D2T</scene>, <scene name='pdbligand=ERY:ERYTHROMYCIN+A'>ERY</scene>, <scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene>, <scene name='pdbligand=G7M:N7-METHYL-GUANOSINE-5-MONOPHOSPHATE'>G7M</scene>, <scene name='pdbligand=H2U:5,6-DIHYDROURIDINE-5-MONOPHOSPHATE'>H2U</scene>, <scene name='pdbligand=MA6:6N-DIMETHYLADENOSINE-5-MONOPHOSHATE'>MA6</scene>, <scene name='pdbligand=MEQ:N5-METHYLGLUTAMINE'>MEQ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OMC:O2-METHYLYCYTIDINE-5-MONOPHOSPHATE'>OMC</scene>, <scene name='pdbligand=OMG:O2-METHYLGUANOSINE-5-MONOPHOSPHATE'>OMG</scene>, <scene name='pdbligand=OMU:O2-METHYLURIDINE+5-MONOPHOSPHATE'>OMU</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=T6A:N-[N-(9-B-D-RIBOFURANOSYLPURIN-6-YL)CARBAMOYL]THREONINE-5-MONOPHOSPHATE'>T6A</scene>, <scene name='pdbligand=UR3:3-METHYLURIDINE-5-MONOPHOSHATE'>UR3</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7q4k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7q4k OCA], [https://pdbe.org/7q4k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7q4k RCSB], [https://www.ebi.ac.uk/pdbsum/7q4k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7q4k ProSAT]</span></td></tr>
[[Category: Ngo, S]]
</table>
[[Category: Boel, G]]
== Function ==
[[Category: Leroy, E.C]]
[https://www.uniprot.org/uniprot/RL15_ECOLI RL15_ECOLI] This protein binds the 5S rRNA. It is required for the late stages of subunit assembly, and is essential for 5S rRNA assembly onto the ribosome.[HAMAP-Rule:MF_01341_B]
[[Category: Soufari, H]]
__TOC__
[[Category: Ousalem, F]]
</StructureSection>
[[Category: Fostier, C.R]]
[[Category: Escherichia coli]]
[[Category: Hashem, Y]]
[[Category: Large Structures]]
[[Category: Innis, A]]
[[Category: Streptococcus pneumoniae]]
[[Category: Boel G]]
[[Category: Fostier CR]]
[[Category: Hashem Y]]
[[Category: Innis A]]
[[Category: Leroy EC]]
[[Category: Ngo S]]
[[Category: Ousalem F]]
[[Category: Soufari H]]
Retrieved from "https://proteopedia.org/7q4k"