8avv: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 8avv is ~~ON HOLD until Paper Publication~~

==Cryo-EM structure of DrBphP photosensory module in Pr state==

~~Authors~~:

== Structural highlights ==

<table><tr><td colspan='2'>[[8avv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8AVV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8AVV FirstGlance]. <br>

~~Description~~:

</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LBV:3-[2-[(Z)-[3-(2-CARBOXYETHYL)-5-[(Z)-(4-ETHENYL-3-METHYL-5-OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-4-METHYL-PYRROL-1-IUM-2-YLIDENE]METHYL]-5-[(Z)-[(3E)-3-ETHYLIDENE-4-METHYL-5-OXIDANYLIDENE-PYRROLIDIN-2-YLIDENE]METHYL]-4-METHYL-1H-PYRROL-3-YL]PROPANOIC+ACID'>LBV</scene></td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8avv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8avv OCA], [https://pdbe.org/8avv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8avv RCSB], [https://www.ebi.ac.uk/pdbsum/8avv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8avv ProSAT]</span></td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/BPHY_DEIRA BPHY_DEIRA] Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Could also absorb green light. May participate in regulating pigment synthesis like the carotenoid deinoxanthin which could protect the bacterium from intense visible light.[https://www.uniprot.org/uniprot/Q9RZA5_DEIRA Q9RZA5_DEIRA]

__TOC__

</StructureSection>

[[Category: Deinococcus radiodurans R1]]

[[Category: Large Structures]]

[[Category: Takala H]]

[[Category: Wahlgren WY]]

[[Category: Westenhoff S]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 8avv is ON HOLD  until Paper Publication
+==Cryo-EM structure of DrBphP photosensory module in Pr state==
+<StructureSection load='8avv' size='340' side='right'caption='[[8avv]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[8avv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8AVV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8AVV FirstGlance]. <br>
-Description:
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LBV:3-[2-[(Z)-[3-(2-CARBOXYETHYL)-5-[(Z)-(4-ETHENYL-3-METHYL-5-OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-4-METHYL-PYRROL-1-IUM-2-YLIDENE]METHYL]-5-[(Z)-[(3E)-3-ETHYLIDENE-4-METHYL-5-OXIDANYLIDENE-PYRROLIDIN-2-YLIDENE]METHYL]-4-METHYL-1H-PYRROL-3-YL]PROPANOIC+ACID'>LBV</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8avv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8avv OCA], [https://pdbe.org/8avv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8avv RCSB], [https://www.ebi.ac.uk/pdbsum/8avv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8avv ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/BPHY_DEIRA BPHY_DEIRA] Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Could also absorb green light. May participate in regulating pigment synthesis like the carotenoid deinoxanthin which could protect the bacterium from intense visible light.[https://www.uniprot.org/uniprot/Q9RZA5_DEIRA Q9RZA5_DEIRA]
+__TOC__
+</StructureSection>
+[[Category: Deinococcus radiodurans R1]]
+[[Category: Large Structures]]
+[[Category: Takala H]]
+[[Category: Wahlgren WY]]
+[[Category: Westenhoff S]]