1ipf: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
Line 1: Line 1:
[[Image:1ipf.gif|left|200px]]
{{Seed}}
[[Image:1ipf.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1ipf|  PDB=1ipf  |  SCENE=  }}  
{{STRUCTURE_1ipf|  PDB=1ipf  |  SCENE=  }}  


'''TROPINONE REDUCTASE-II COMPLEXED WITH NADPH AND TROPINONE'''
===TROPINONE REDUCTASE-II COMPLEXED WITH NADPH AND TROPINONE===




==Overview==
<!--
To understand the catalytic mechanism of an enzyme, it is crucial to determine the crystallographic structures corresponding to the individual reaction steps. Here, we report two crystal structures of enzyme-substrate complexes prior to reaction initiation: tropinone reductase-II (TR-II)-NADPH and TR-II-NADPH-tropinone complexes, determined from the identical crystals. A combination of two kinetic crystallographic techniques, a continuous flow of the substrates and Laue diffraction measurements, enabled us to capture the transit structures prior to the reaction proceeding. A structure comparison of the enzyme-substrate complex elucidated in this study with the enzyme-product complex in our previous study indicates that one of the substrates, tropinone, is rotated relative to the product so as to make the spatial organization in the active site favorable for the reaction to proceed. Side chains of the residues in the active site also alter their conformations to keep the complementarity of the space for the substrate or the product and to assist the rotational movement.
The line below this paragraph, {{ABSTRACT_PUBMED_12741812}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 12741812 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_12741812}}


==About this Structure==
==About this Structure==
Line 40: Line 44:
[[Category: Tropane alkaloid biosynthesis]]
[[Category: Tropane alkaloid biosynthesis]]
[[Category: Tropinone]]
[[Category: Tropinone]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 20:15:23 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 13:46:03 2008''

Revision as of 10:46, 1 July 2008

File:1ipf.png

Template:STRUCTURE 1ipf

TROPINONE REDUCTASE-II COMPLEXED WITH NADPH AND TROPINONE

Template:ABSTRACT PUBMED 12741812

About this Structure

1IPF is a Single protein structure of sequence from Datura stramonium. Full crystallographic information is available from OCA.

Reference

Capturing enzyme structure prior to reaction initiation: tropinone reductase-II-substrate complexes., Yamashita A, Endo M, Higashi T, Nakatsu T, Yamada Y, Oda J, Kato H, Biochemistry. 2003 May 20;42(19):5566-73. PMID:12741812

Page seeded by OCA on Tue Jul 1 13:46:03 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=1ipf&oldid=612933"