Biological Unit: Difference between revisions

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Eric Martz (talk | contribs)
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The following sources generate biological unit models from REMARK 350. Be aware that, as explained above, REMARK 350 may be incorrect.
The following sources generate biological unit models from REMARK 350. Be aware that, as explained above, REMARK 350 may be incorrect.


===FirstGlance in Jmol===
===FirstGlance in Jmol Limitation===
[http://firstglance.jmol.org FirstGlance] automatically '''displays''' biological unit 1, and enables you to work with it using all of the tools within FirstGlance. However, you '''cannot save the biological unit model in PDB format''', because internally
[http://firstglance.jmol.org FirstGlance] automatically '''displays''' biological unit 1, and enables you to work with it using all of the tools within FirstGlance. However, you '''cannot save the biological unit model in PDB format''', because internally
JSmol assigns multiple-character names to duplicated chains. For example, with [[3hyd]], chain A is duplicated to chains A1, A2, A3. These chain names render the pseudo PDB file saved from FirstGlance/JSmol unreadable for many software packages.
JSmol assigns multiple-character names to duplicated chains. For example, with [[3hyd]], chain A is duplicated to chains A1, A2, A3. These chain names render the pseudo PDB file saved from FirstGlance/JSmol unreadable for many software packages.