Biological Unit: Difference between revisions
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==Web Sites== | ==Web Sites== | ||
*[https://pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/biological-assemblies Introduction to Biological Assemblies and the PDB Archive] | |||
*[http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html Protein Interfaces, Surfaces and Assemblies Server] (PISA) at the European Bioinformatics Institute. | *[http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html Protein Interfaces, Surfaces and Assemblies Server] (PISA) at the European Bioinformatics Institute. | ||
*[http://pqs.ebi.ac.uk Probable Quaternary Structure Server] (PQS) at the European Bioinformatics Institute. | <!--*[http://pqs.ebi.ac.uk Probable Quaternary Structure Server] (PQS) at the European Bioinformatics Institute. Retired since 2009!--> | ||
*[http://dunbrack.fccc.edu/ProtBuD.php ProtBud, a database of biological unit structures] Offers comparisons and downloads of the results from REMARK 350 vs. PQS. | <!-- protBud appears to be retired. In November, 2022, I cannot find it. -Eric Martz | ||
*[http://dunbrack.fccc.edu/ProtBuD.php ProtBud, a database of biological unit structures] Offers comparisons and downloads of the results from REMARK 350 vs. PQS.--> | |||
*[https://www.molnac.unisa.it/BioTools/cocomaps/ COCOMAPS (bioCOmplexes COntact MAPS)] is a web server for analysis and visualization of the interfaces present in biological complexes, such as protein-protein, protein-DNA and protein-RNA complexes, making use of intermolecular contact maps. | *[https://www.molnac.unisa.it/BioTools/cocomaps/ COCOMAPS (bioCOmplexes COntact MAPS)] is a web server for analysis and visualization of the interfaces present in biological complexes, such as protein-protein, protein-DNA and protein-RNA complexes, making use of intermolecular contact maps. | ||
