4u4r: Difference between revisions
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4u4r]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujp 4ujp], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujq 4ujq], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujr 4ujr], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujs 4ujs] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujt 4ujt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U4R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U4R FirstGlance]. <br> | <table><tr><td colspan='2'>[[4u4r]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujp 4ujp], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujq 4ujq], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujr 4ujr], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujs 4ujs] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ujt 4ujt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U4R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U4R FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3H3:4-{(2R,5S,6E)-2-HYDROXY-5-METHYL-7-[(2R,3S,4E,6Z,10E)-3-METHYL-12-OXOOXACYCLODODECA-4,6,10-TRIEN-2-YL]-4-OXOOCT-6-EN-1-YL}PIPERIDINE-2,6-DIONE'>3H3</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OHX:OSMIUM+(III)+HEXAMMINE'>OHX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.801Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3H3:4-{(2R,5S,6E)-2-HYDROXY-5-METHYL-7-[(2R,3S,4E,6Z,10E)-3-METHYL-12-OXOOXACYCLODODECA-4,6,10-TRIEN-2-YL]-4-OXOOCT-6-EN-1-YL}PIPERIDINE-2,6-DIONE'>3H3</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OHX:OSMIUM+(III)+HEXAMMINE'>OHX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u4r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u4r OCA], [https://pdbe.org/4u4r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u4r RCSB], [https://www.ebi.ac.uk/pdbsum/4u4r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u4r ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u4r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u4r OCA], [https://pdbe.org/4u4r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u4r RCSB], [https://www.ebi.ac.uk/pdbsum/4u4r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u4r ProSAT]</span></td></tr> | ||
</table> | </table> | ||
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==See Also== | ==See Also== | ||
*[[Ribosome 3D structures|Ribosome 3D structures]] | |||
*[[3D sructureseceptor for activated protein kinase C 1|3D sructureseceptor for activated protein kinase C 1]] | *[[3D sructureseceptor for activated protein kinase C 1|3D sructureseceptor for activated protein kinase C 1]] | ||
== References == | == References == | ||
Revision as of 12:26, 20 December 2023
Crystal structure of Lactimidomycin bound to the yeast 80S ribosome
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