4v55: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 4: | Line 4: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4v55]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbh 2qbh], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbi 2qbi], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbj 2qbj] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbk 2qbk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V55 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V55 FirstGlance]. <br> | <table><tr><td colspan='2'>[[4v55]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbh 2qbh], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbi 2qbi], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbj 2qbj] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbk 2qbk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V55 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V55 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLL:(2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL'>LLL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLL:(2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL'>LLL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v55 OCA], [https://pdbe.org/4v55 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v55 RCSB], [https://www.ebi.ac.uk/pdbsum/4v55 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v55 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v55 OCA], [https://pdbe.org/4v55 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v55 RCSB], [https://www.ebi.ac.uk/pdbsum/4v55 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v55 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
Latest revision as of 18:03, 20 September 2023
Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).
| ||||||||||||
