BASIL2023GV1ZBS: Difference between revisions
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=== DALI === | === DALI === | ||
DALI is a global alignment software that is used to match proteins up to possible structural matches within the Protein Data Bank (PDB). | DALI is a global alignment software that is used to match proteins up to possible structural matches within the Protein Data Bank (PDB). | ||
[[Image:DALI_alignment.png]] | [[Image:DALI_alignment.png]] | ||
This is the DALI alignment of 1ZBS and 2CH5, where 1ZBS is colored in green and 2CH5 is colored in yellow. The best results from the DALI alignment were mainly proteins with unknown functions, which makes it difficult to deduce a possible function off of. Because of these results, 2CH5, while only matching parts of the sequence was the best result for this analysis as it's function is known. The function of 2CH5 is a NAG kinase, which would further support the thought that 1ZBS could also be a NAG kinase. | This is the DALI alignment of 1ZBS and 2CH5, where 1ZBS is colored in green and 2CH5 is colored in yellow. The best results from the DALI alignment were mainly proteins with unknown functions, which makes it difficult to deduce a possible function off of. Because of these results, 2CH5, while only matching parts of the sequence was the best result for this analysis as it's function is known. The function of 2CH5 is a NAG kinase, which would further support the thought that 1ZBS could also be a NAG kinase. | ||
==''' Substrate Possibilities '''== | ==''' Substrate Possibilities '''== | ||
