8oed: Difference between revisions

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~~'''Unreleased structure'''~~

~~The entry 8oed is ON HOLD until Paper Publication~~

==Aspergillus niger ferulic acid decarboxylase (Fdc) S145C-P289C (DB2) variant in complex with prenylated flavin hydroxylated at the C1 prime position==

~~Authors: Roberts, G.W., Leys, D.~~

== Structural highlights ==

<table><tr><td colspan='2'>[[8oed]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_niger_CBS_513.88 Aspergillus niger CBS 513.88]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8OED OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=8OED FirstGlance].

~~Description:~~ Aspergillus niger ferulic acid decarboxylase (Fdc) S145C-P289C (DB2) variant in complex with prenylated flavin hydroxylated at the C1 prime position

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.37Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BYN:hydroxylated+prenyl-FMN'>BYN</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>

[[Category: Leys, D]]

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=8oed FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8oed OCA], [https://pdbe.org/8oed PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8oed RCSB], [https://www.ebi.ac.uk/pdbsum/8oed PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8oed ProSAT]</td></tr>

[[Category: Roberts~~, G.W~~]]

</table>

== Function ==

[https://www.uniprot.org/uniprot/FDC1_ASPNC FDC1_ASPNC] Catalyzes the reversible decarboxylation of aromatic carboxylic acids like ferulic acid, p-coumaric acid or cinnamic acid, producing the corresponding vinyl derivatives 4-vinylphenol, 4-vinylguaiacol, and styrene, respectively, which play the role of aroma metabolites.[HAMAP-Rule:MF_03196]<ref>PMID:26083754</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Aspergillus niger CBS 513 88]]

[[Category: Large Structures]]

[[Category: Leys D]]

[[Category: Roberts GW]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 8oed is ON HOLD  until Paper Publication
+==Aspergillus niger ferulic acid decarboxylase (Fdc) S145C-P289C (DB2) variant in complex with prenylated flavin hydroxylated at the C1 prime position==
+<StructureSection load='8oed' size='340' side='right'caption='[[8oed]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
-Authors: Roberts, G.W., Leys, D.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[8oed]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_niger_CBS_513.88 Aspergillus niger CBS 513.88]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8OED OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8OED FirstGlance]. <br>
-Description: Aspergillus niger ferulic acid decarboxylase (Fdc) S145C-P289C (DB2) variant in complex with prenylated flavin hydroxylated at the C1 prime position
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.37&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BYN:hydroxylated+prenyl-FMN'>BYN</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
-[[Category: Leys, D]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8oed FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8oed OCA], [https://pdbe.org/8oed PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8oed RCSB], [https://www.ebi.ac.uk/pdbsum/8oed PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8oed ProSAT]</span></td></tr>
-[[Category: Roberts, G.W]]
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/FDC1_ASPNC FDC1_ASPNC] Catalyzes the reversible decarboxylation of aromatic carboxylic acids like ferulic acid, p-coumaric acid or cinnamic acid, producing the corresponding vinyl derivatives 4-vinylphenol, 4-vinylguaiacol, and styrene, respectively, which play the role of aroma metabolites.[HAMAP-Rule:MF_03196]<ref>PMID:26083754</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Aspergillus niger CBS 513 88]]
+[[Category: Large Structures]]
+[[Category: Leys D]]
+[[Category: Roberts GW]]