1ms6: Difference between revisions

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New page: left|200px<br /> <applet load="1ms6" size="450" color="white" frame="true" align="right" spinBox="true" caption="1ms6, resolution 1.90Å" /> '''Dipeptide Nitrile I...
 
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[[Image:1ms6.gif|left|200px]]<br />
[[Image:1ms6.gif|left|200px]]<br /><applet load="1ms6" size="350" color="white" frame="true" align="right" spinBox="true"  
<applet load="1ms6" size="450" color="white" frame="true" align="right" spinBox="true"  
caption="1ms6, resolution 1.90&Aring;" />
caption="1ms6, resolution 1.90&Aring;" />
'''Dipeptide Nitrile Inhibitor Bound to Cathepsin S.'''<br />
'''Dipeptide Nitrile Inhibitor Bound to Cathepsin S.'''<br />


==Overview==
==Overview==
The specificity of the immune response relies on processing of foreign, proteins and presentation of antigenic peptides at the cell surface., Inhibition of antigen presentation, and the subsequent activation of, T-cells, should, in theory, modulate the immune response. The cysteine, protease Cathepsin S performs a fundamental step in antigen presentation, and therefore represents an attractive target for inhibition. Herein, we, report a series of potent and reversible Cathepsin S inhibitors based on, dipeptide nitriles. These inhibitors show nanomolar inhibition of the, target enzyme as well as cellular potency in a human B cell line. The, first X-ray crystal structure of a reversible inhibitor cocrystallized, with Cathepsin S is also reported.
The specificity of the immune response relies on processing of foreign proteins and presentation of antigenic peptides at the cell surface. Inhibition of antigen presentation, and the subsequent activation of T-cells, should, in theory, modulate the immune response. The cysteine protease Cathepsin S performs a fundamental step in antigen presentation and therefore represents an attractive target for inhibition. Herein, we report a series of potent and reversible Cathepsin S inhibitors based on dipeptide nitriles. These inhibitors show nanomolar inhibition of the target enzyme as well as cellular potency in a human B cell line. The first X-ray crystal structure of a reversible inhibitor cocrystallized with Cathepsin S is also reported.


==About this Structure==
==About this Structure==
1MS6 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with BLN as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Cathepsin_S Cathepsin S], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.27 3.4.22.27] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1MS6 OCA].  
1MS6 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=BLN:'>BLN</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Cathepsin_S Cathepsin S], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.27 3.4.22.27] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MS6 OCA].  


==Reference==
==Reference==
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[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Bekkali, Y.]]
[[Category: Bekkali, Y.]]
[[Category: Brown, M.L.]]
[[Category: Brown, M L.]]
[[Category: Crane, K.]]
[[Category: Crane, K.]]
[[Category: Cywin, C.L.]]
[[Category: Cywin, C L.]]
[[Category: Davidson, W.]]
[[Category: Davidson, W.]]
[[Category: DeTuri, M.]]
[[Category: DeTuri, M.]]
[[Category: Emmanuel, M.J.]]
[[Category: Emmanuel, M J.]]
[[Category: Freeman, D.M.]]
[[Category: Freeman, D M.]]
[[Category: Frye, L.L.]]
[[Category: Frye, L L.]]
[[Category: Giradot, M.]]
[[Category: Giradot, M.]]
[[Category: Grygon, C.A.]]
[[Category: Grygon, C A.]]
[[Category: Hao, M.H.]]
[[Category: Hao, M H.]]
[[Category: Hopkins, J.L.]]
[[Category: Hopkins, J L.]]
[[Category: Hrapchak, M.]]
[[Category: Hrapchak, M.]]
[[Category: Labadia, M.E.]]
[[Category: Labadia, M E.]]
[[Category: McNeil, D.]]
[[Category: McNeil, D.]]
[[Category: Morwick, T.]]
[[Category: Morwick, T.]]
[[Category: Pav, S.]]
[[Category: Pav, S.]]
[[Category: Spero, D.M.]]
[[Category: Spero, D M.]]
[[Category: Thomson, D.S.]]
[[Category: Thomson, D S.]]
[[Category: Wang, Y.]]
[[Category: Wang, Y.]]
[[Category: Ward, Y.D.]]
[[Category: Ward, Y D.]]
[[Category: White, D.]]
[[Category: White, D.]]
[[Category: Zindell, R.]]
[[Category: Zindell, R.]]
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[[Category: protease]]
[[Category: protease]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 18:14:30 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:58:32 2008''