Aliskiren: Difference between revisions

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<scene name='10/1020133/Cv/3'>Renin with bound Aliskiren</scene> ([[2v0z]]).
<scene name='10/1020133/Cv/3'>Renin with bound Aliskiren</scene> ([[2v0z]]).


<scene name='10/1020133/Cv/7'>Aliskiren binding site</scene>.
<scene name='10/1020133/Cv/9'>Aliskiren binding site</scene>. Water molecules are shown as red spheres.


Aliskiren is a hydrophilic molecule.  When bound to renin, aliskiren occupies the S1, S1', S2', and S3 hydrophobic regions of renin. Most importantly aliskiren occupies the S3<sup>SP</sup> region that is equally hydrophobic and hydrophilic and greatly increases binding affinity.<ref>PMID: 20731374</ref>  Aliskiren interacts with multiple residues in renin. The hydroxyl group hydrogen bonds both <scene name='10/1020133/Asp32/1'>aspartate 32</scene> oxygens. The methoxy group in the S3 hydrophobic region hydrogen bonds to secondary amine group of <scene name='10/1020133/Tyr14/1'>tyrosine 14</scene>. The amide group hydrogen bonds with the secondary amine of <scene name='10/1020133/Ser76/1'>serine 76</scene>.<ref>PMID: 20855222</ref> And the terminal amide hydrogen bonds with <scene name='Sandbox_Reserved_489/Arg_74/1'>arginine 74</scene> in the S2' hydrophobic pocket.<ref>PMID: 21708467</ref>
Aliskiren is a hydrophilic molecule.  When bound to renin, aliskiren occupies the S1, S1', S2', and S3 hydrophobic regions of renin. Most importantly aliskiren occupies the S3<sup>SP</sup> region that is equally hydrophobic and hydrophilic and greatly increases binding affinity.<ref>PMID: 20731374</ref>  Aliskiren interacts with multiple residues in renin. The hydroxyl group hydrogen bonds both <scene name='10/1020133/Asp32/1'>aspartate 32</scene> oxygens. The methoxy group in the S3 hydrophobic region hydrogen bonds to secondary amine group of <scene name='10/1020133/Tyr14/1'>tyrosine 14</scene>. The amide group hydrogen bonds with the secondary amine of <scene name='10/1020133/Ser76/1'>serine 76</scene>.<ref>PMID: 20855222</ref> And the terminal amide hydrogen bonds with <scene name='Sandbox_Reserved_489/Arg_74/1'>arginine 74</scene> in the S2' hydrophobic pocket.<ref>PMID: 21708467</ref>

Revision as of 14:11, 20 December 2023

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References

Proteopedia Page Contributors and Editors (what is this?)

Alexander Berchansky