Exosome 3D structures: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Michal Harel (talk | contribs)
No edit summary
Michal Harel (talk | contribs)
No edit summary
Line 24: Line 24:
**[[5okz]] – yCsl4 + Rrp40 + Rrp42 + Rrp43 + Rrp45 + Rrp46 + Rrp4 + SKI6 + Mtr3 + M-phase phosphoprotein 6  <br />
**[[5okz]] – yCsl4 + Rrp40 + Rrp42 + Rrp43 + Rrp45 + Rrp46 + Rrp4 + SKI6 + Mtr3 + M-phase phosphoprotein 6  <br />
**[[5g06]] – yCsl4 + Rrp40 + Rrp42 + Rrp43 + Rrp45 + Rrp46 + Rrp4 + Rrp6 + SKI6 + Mtr3 + superkiller protein 7 + DIS3 <br />
**[[5g06]] – yCsl4 + Rrp40 + Rrp42 + Rrp43 + Rrp45 + Rrp46 + Rrp4 + Rrp6 + SKI6 + Mtr3 + superkiller protein 7 + DIS3 <br />
**[[8pel]], [[8r1o]] – RRP45 in exosome core – ''Thermochaetoides thermophila''<br />
**[[8xfx]] – TaRRP41 + RRP42 – ''Thermoplasma acidophilum''<br />
**[[8xie]] – TaRRP41 + RRP42 + RRP4 <br />


*Exosome complex with RNA
*Exosome complex with RNA
Line 31: Line 35:
**[[7z52]] – hMTR4 + ZCCHC8 + RNA<br />
**[[7z52]] – hMTR4 + ZCCHC8 + RNA<br />
**[[7s7b]], [[7s7c]] – hMTR4 + ZCCHC8 + RNA-binding protein 7 + RNA<br />
**[[7s7b]], [[7s7c]] – hMTR4 + ZCCHC8 + RNA-binding protein 7 + RNA<br />
**[[9g8m]], [[9g8n]], [[9g8o]], [[9g8p]] – hSKI2 in exosome complex + RNA – Cryo EM<br />
**[[2jea]] - SsRRP4 + RRP41 + RRP42 + exonuclease 1 + RNA-binding protein 1 + RNA<br />
**[[2jea]] - SsRRP4 + RRP41 + RRP42 + exonuclease 1 + RNA-binding protein 1 + RNA<br />
**[[3m7n]] – AfCSL4 + RRP41 + RRP42 + RNA<br />
**[[3m7n]] – AfCSL4 + RRP41 + RRP42 + RNA<br />
Line 41: Line 46:
**[[5jea]] – yCSL4 + RRP40 + RRP42 + RRP43 + RRP45 + RRP46 + RRP4 + RRP6 + SKI6 + MTR3 + superkiller protein 7 + DIS3 + RNA <br />
**[[5jea]] – yCSL4 + RRP40 + RRP42 + RRP43 + RRP45 + RRP46 + RRP4 + RRP6 + SKI6 + MTR3 + superkiller protein 7 + DIS3 + RNA <br />
**[[5jea]] – yCSL4 + RRP40 + RRP42 + RRP43 + RRP45 + RRP46 + RRP4 + RRP6 + SKI6 + MTR3 + LRP1 + RNA <br />
**[[5jea]] – yCSL4 + RRP40 + RRP42 + RRP43 + RRP45 + RRP46 + RRP4 + RRP6 + SKI6 + MTR3 + LRP1 + RNA <br />
**[[8qcf]] – ySKI2 in exosome complex + RNA – Cryo EM<br />
}}
}}


[[Category: Topic Page]]
[[Category: Topic Page]]

Revision as of 09:04, 4 June 2025

3D structures of exosome

Updated on 04-June-2025

    • 2cpr – hRrp6 HRDC domain – human - NMR
    • 3saf, 3sag, 3sah – hRrp6 catalytic domain (mutant)
    • 6ieg – hMtr4
    • 6ieh – hMtr4 + NRDE2
    • 6c90, 7z4y, 7z4z – hMtr4 + ZCCHC8
    • 6ro1 – hMtr4 + NVL
    • 2nn6 – hCcl4 + Rrp40 + Rrp41 + Rrp42 + Rrp43 + Rrp44 + Rrp45 + Rrp46 + Rrp4 + Mtr3
    • 2je6, 2br2 – SsRrp4 + Rrp41 + Rrp42 – Sulfolobus solfataricus
    • 2jeb - SsRrp4 + Rrp41 + RRP42 + exonuclease 1 + RNA-binding protein 1 + Mn
    • 2ba0 – AfRrp4 + Rrp41 + Rrp42 – Archaeoglobus fulgidus
    • 2ba1 – AfCsl4 + Rrp41 + Rrp42
    • 2hbj, 2hbk – yRrp6 (mutant) - yeast
    • 2ja9 – yRrp6
    • 2hbl, 2hbm – yRrp6 (mutant) + nucleotide
    • 4wfc – yRrp6 +Rrp47
    • 4wfd – yRrp6 +Rrp47 + MTR4
    • 2wp8 – yRrp45 + SKI6 + DIS3
    • 5okz – yCsl4 + Rrp40 + Rrp42 + Rrp43 + Rrp45 + Rrp46 + Rrp4 + SKI6 + Mtr3 + M-phase phosphoprotein 6
    • 5g06 – yCsl4 + Rrp40 + Rrp42 + Rrp43 + Rrp45 + Rrp46 + Rrp4 + Rrp6 + SKI6 + Mtr3 + superkiller protein 7 + DIS3
    • 8pel, 8r1o – RRP45 in exosome core – Thermochaetoides thermophila
    • 8xfx – TaRRP41 + RRP42 – Thermoplasma acidophilum
    • 8xie – TaRRP41 + RRP42 + RRP4
  • Exosome complex with RNA
    • 6h25 – hCSL4 + RRP40 + RRP41 + RRP42 + RRP43 + RRP44 + RRP45 + RRP46 + RRP4 + MTR3 + M-phase phosphoprotein 6 + RNA – Cryo EM
    • 6d6r, 6d6q – hCSL4 + RRP40 + RRP41 + RRP42 + RRP43 + RRP44 + RRP45 + RRP46 + RRP4 + MTR3 + MTR4 + component 10 + M-phase phosphoprotein 6 + DNA/RNA + RNA – Cryo EM
    • 7z52 – hMTR4 + ZCCHC8 + RNA
    • 7s7b, 7s7c – hMTR4 + ZCCHC8 + RNA-binding protein 7 + RNA
    • 9g8m, 9g8n, 9g8o, 9g8p – hSKI2 in exosome complex + RNA – Cryo EM
    • 2jea - SsRRP4 + RRP41 + RRP42 + exonuclease 1 + RNA-binding protein 1 + RNA
    • 3m7n – AfCSL4 + RRP41 + RRP42 + RNA
    • 2m85 – AfCSL4 + RRP41 (mutant) + RRP42 (mutant) + RNA
    • 2vnu, 5c0y – yRRP6 + RNA
    • 4ifd – yCSL4 + RRP40 + RRP41 + RRP42 + RRP43 + RRP44 + RRP45 + RRP46 + RRP4 + MTR3 + RNA
    • 4oo1 – yCSL4 + RRP40 + RRP42 + RRP43 + RRP45 + RRP46 + RRP4 + RRP6 + SKI6 + MTR3 + RNA
    • 5vzj – yCSL4 + RRP40 + RRP42 + RRP43 + RRP45 + RRP46 + RRP4 + RRP6 + SKI6 + MTR3 + M-phase phosphoprotein 6 + DIS3 + RNA
    • 5k36, 5c0x, 5c0w – yCSL4 + RRP40 + RRP42 + RRP43 + RRP45 + RRP46 + RRP4 + RRP6 + SKI6 + MTR3 + DIS3 + RNA
    • 5jea – yCSL4 + RRP40 + RRP42 + RRP43 + RRP45 + RRP46 + RRP4 + RRP6 + SKI6 + MTR3 + superkiller protein 7 + DIS3 + RNA
    • 5jea – yCSL4 + RRP40 + RRP42 + RRP43 + RRP45 + RRP46 + RRP4 + RRP6 + SKI6 + MTR3 + LRP1 + RNA
    • 8qcf – ySKI2 in exosome complex + RNA – Cryo EM

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Openfox